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ComparativeGenomicsToolkit / cactus

Official home of genome aligner based upon notion of Cactus graphs
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plug in path normalizer #1483

Closed glennhickey closed 2 months ago

glennhickey commented 2 months ago

Plug in the path normalizer from here just after gaffix. Should prevent cases (which seem rare) of different paths being equivalent, resulting in invalid AT fields in the VCF.