ComparativeGenomicsToolkit / cactus

Official home of genome aligner based upon notion of Cactus graphs
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update to patched vcfwave; let it work with multiallelics #1535

Closed glennhickey closed 16 hours ago

glennhickey commented 20 hours ago

Pull in latest vcflib with fix for https://github.com/vcflib/vcflib/issues/403

I was using multi-allelic splitting as kind of a workaround for this issue (output seemed less wrong on biallelics), but if the issue is resolved then this shouldn't be needed anymore so I've removed it.