Open ybukhman opened 3 years ago
Hi, I have exactly the same error. I have been trying to tune the lod options when generating the hub, like the --lodScale. So far I have not solved this problem. Anyone has reached to some solution, or has a sugestion? Thanks a lot.
Hello,
here are the steps to reproduce the problem:
Assembly hub URL: http://genome.ucsc.edu/cgi-bin/hgHubConnect?hgHub_do_redirect=on&hgHubConnect.remakeTrackHub=on&hgHub_do_firstDb=1&hubUrl=http://www.morgridge.net/dmz/ybukhman/NILERAT/4_rodents_hub/hub.txt
Using A.niloticus genome as the reference, try displaying the following coordinates: NW_023044993.1:34870742-34927456.
A screen shot of the error:![4-rodents assembly hub display error](https://user-images.githubusercontent.com/5497325/117875554-ed725200-b267-11eb-8e76-bb4f02f861f7.png)
Commands used to generate the hub:
Cactus version 1.2.3 (hal2assemblyHub.py does not work in 1.3.0: see https://github.com/ComparativeGenomicsToolkit/cactus/issues/463)
Thanks.
Yury