Closed glennhickey closed 3 years ago
halMergeChroms can be used to combine chromosome hal files, as made by cactus-align-batch within the Cactus Pangenome Pipeline into a single hal. Ex
halMergeChroms
cactus-align-batch
halMergeChroms chr1.hal,chr2.hal,chr3.hal chr1-3.hal
halMergeChromscan be used to combine chromosome hal files, as made bycactus-align-batchwithin the Cactus Pangenome Pipeline into a single hal. Ex