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ComparativeGenomicsToolkit
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taffy
This is a library C/Python/CLI for working with TAF (.taf,.taf.gz) and MAF (.maf) alignment files
MIT License
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Better error msg when opening gzipped input without htslib
#16
glennhickey
closed
1 year ago
0
WIP : playing with more aggressive normalization
#15
glennhickey
closed
1 year ago
1
Support MAF indexing
#14
glennhickey
closed
1 year ago
0
Add taffy stats command
#13
glennhickey
closed
1 year ago
0
Reduce default index interval size
#12
glennhickey
closed
1 year ago
3
Add output-format option to taffy view
#11
glennhickey
opened
1 year ago
0
Tune indexing performance
#10
glennhickey
opened
1 year ago
0
Clean up anchor line logic
#9
glennhickey
opened
1 year ago
0
Add blurb on indexing
#8
glennhickey
closed
1 year ago
0
Adding in method for column iteration
#7
benedictpaten
closed
1 year ago
0
Adding in support for tai indexes into python lib
#6
benedictpaten
closed
1 year ago
0
[WIP] Index support
#5
glennhickey
closed
1 year ago
0
Working on adding python bindings to taf (pyTaf). So far I can build …
#4
benedictpaten
closed
1 year ago
0
Small fixes to let make test run CGL_DEBUG=ultra
#3
glennhickey
closed
1 year ago
0
switch to the sonLib in comparativeGenomicsToolkit
#2
glennhickey
closed
1 year ago
1
Hal support for taf_add_gap_bases
#1
glennhickey
closed
1 year ago
0
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