R/Bioconductor package for handling Genomic interaction data, annotating genomic features with interaction information and producing summary plots / statistics
Currently summariseBy.... only counts the total number of interactions involving that feature with other features. Need to update to also calculate the number of unique features of a specific class it is interacting with (i.e number of enhancers, number of CTCF sites).
Currently summariseBy.... only counts the total number of interactions involving that feature with other features. Need to update to also calculate the number of unique features of a specific class it is interacting with (i.e number of enhancers, number of CTCF sites).