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ConesaLab / SQANTI3

Tool for the Quality Control of Long-Read Defined Transcriptomes
GNU General Public License v3.0
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The installation of SQANTI3-5.2.1 encountered an error #310

Closed biochristmas closed 4 months ago

biochristmas commented 4 months ago

Is there an existing issue for this?

Have you loaded the SQANTI3.env conda environment?

Problem description

Hi, I recently installed SQANTI3, and when I executed the code “conda env create -f SQANTI3.conda_env.yml”, an error occurred. The error message was

Code sample

Here’s the command I used to install the software: wget https://github.com/ConesaLab/SQANTI3/archive/refs/tags/v5.2.1.tar.gz tar -xf v5.2.1.tar.gz cd SQANTI3-5.2.1 conda env create -f SQANTI3.conda_env.yml

Error

error.txt

Anything else?

No response

weiwei4396 commented 4 months ago

I have the same problem

alexpan00 commented 4 months ago

Hi,

This is caused by some problems with the latest Python version, if you force it to be <= 3.11 it should work. In the yml replace the Python line with this:

Alejandro

biochristmas commented 4 months ago

Hi,

This is caused by some problems with the latest Python version, if you force it to be <= 3.11 it should work. In the yml replace the Python line with this:

  • python>=3.7.6,<=3.11

Alejandro

Thank you for your prompt response. The error has been resolved after modifying the Python version