Match `sqanti3_filter.py`'s no output prefix behavior in `sqanti3_rescue.py`

ConesaLab / SQANTI3

Tool for the Quality Control of Long-Read Defined Transcriptomes

GNU General Public License v3.0

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Match `sqanti3_filter.py`'s no output prefix behavior in `sqanti3_rescue.py` #316

Open skagawa2 opened 2 months ago

skagawa2 commented 2 months ago

In sqanti3_rescue.py there is a TypeError when running with no -o set. This PR should fix that by matching the behavior in sqanti3_filter.py, shown below.

https://github.com/ConesaLab/SQANTI3/blob/3733cbf60787701b62dce5e943939f78ae329579/sqanti3_filter.py#L224