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CongLabCode / DPAM

A domain parser for Alphafold models
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pdb2fasta: Permission denied #12

Open johnnytam100 opened 1 year ago

johnnytam100 commented 1 year ago

Hi CongLab! I met an error that said pdb2fasta: Permission denied May I know how to deal with this? Thanks!

~/test/test_DPAM/DPAM$ python DPAM.py AF-Q9UQB3-F1-model_v4.pdb AF-Q9UQB3-F1-predicted_aligned_error_v4.json AF-Q9UQB3-F1-model_v4 /home/jupyter/test/test_DPAM/DPAM/ 16 /home/jupyter/script/DPAM/database/

cp: 'AF-Q9UQB3-F1-model_v4.pdb' and '/home/jupyter/test/test_DPAM/DPAM//AF-Q9UQB3-F1-model_v4.pdb' are the same file
start input processing 2023-11-08 02:44:41.288828
sh: 1: /home/jupyter/test/test_DPAM/DPAM/pdb2fasta: Permission denied
CongLabCode commented 11 months ago

Sorry for the late reply. You can change the permission by chmod +x pdb2fasta