petermr
commented
9 years ago accession number should lead to complete genbank entry in which there should be a taxon with id? We should use the ``` --lookup genbank
should return the entry.
Does the Genbank API allow for XML format?
On Fri, Aug 7, 2015 at 10:26 AM, Ross Mounce <notifications@github.com>
wrote:
> @petermr <https://github.com/petermr> do you also have lookup code for
> converting accession number -> taxonID for the NeXML / Newick or should I
> create some? Happy either way just need to know.
>
> —
> Reply to this email directly or view it on GitHub
> <https://github.com/ContentMine/phylotree/issues/8>.
>
--
Peter Murray-Rust
Reader in Molecular Informatics
Unilever Centre, Dep. Of Chemistry
University of Cambridge
CB2 1EW, UK
+44-1223-763069
@petermr do you also have lookup code for converting accession number -> taxonID for the NeXML / Newick or should I create some? Happy either way just need to know.