The clustering scores can take a while to compute when correcting with permutation tests. We already have a parallelized solution over analysis 'chunks' by setting parallel=True. Two ways to speed this up are:
1) optimize the multiprocessing code (may not be implemented in the most efficient way)
2) deriving an analytic solution to correct the clustering scores instead of relying on permutations
The clustering scores can take a while to compute when correcting with permutation tests. We already have a parallelized solution over analysis 'chunks' by setting
parallel=True. Two ways to speed this up are:1) optimize the multiprocessing code (may not be implemented in the most efficient way)
2) deriving an analytic solution to correct the clustering scores instead of relying on permutations