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ContextLab / quail

A python toolbox for analyzing and plotting free recall data
http://cdl-quail.readthedocs.io/en/latest/
MIT License
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feature request: row populated with standard deviations for fried egg object #97

Open ryankirkpatrick57 opened 6 years ago

ryankirkpatrick57 commented 6 years ago

For people who want to make their own error bars, in each column of the fried egg object below the mean, it would be helpful to also have the standard deviation.

jeremymanning commented 6 years ago

Hi @ryankirkpatrick57, thanks for the request! Is this something you’d be interested in helping out with?

ryankirkpatrick57 commented 6 years ago

I would not be interested in helping out with this. I thought it would just be nice to have this idea on your radar as you look to improve quail. I have been using quail in jupyter notebook, so my inelegant workaround has been to calculate the standard deviation in the relevant analysis helper function, print those values to the standard output, and then can copy and paste the values into the relevant notebook cell.

jeremymanning commented 6 years ago

ok-- thanks for the information and we'll keep this in mind as we continue to develop quail.

andrewheusser commented 6 years ago

hey @ryankirkpatrick57, quail wraps seaborn for creating plots, and seaborn allows you to plot error bars in sd units by passing ci='sd'. e.g.:

quail.plot(analyzed_data, ci='sd')

ryankirkpatrick57 commented 6 years ago

Ah, yes. That is also a nice workaround. Thank you for letting me know!