Closed jeremymanning closed 6 years ago
I'm getting the following error when I set weights_function=laplace_weights:
weights_function=laplace_weights
--------------------------------------------------------------------------- ValueError Traceback (most recent call last) <ipython-input-111-5a253239e182> in <module>() ----> 1 recovered_covs_laplace = tc.timecorr(data, mode='across', weights_function=laplace_weights, weights_params=laplace_params) /usr/local/lib/python3.6/site-packages/timecorr/timecorr.py in timecorr(data, weights_function, weights_params, mode, cfun) 98 99 if (mode == 'across') or (type(data) != list) or (len(data) == 1): --> 100 return cfun(data, weights) 101 elif mode == 'within': 102 return list(map(lambda x: cfun(x, weights), data)) /usr/local/lib/python3.6/site-packages/timecorr/helpers.py in isfc(data, timepoint_weights) 132 else: 133 subject_weights = None --> 134 return wisfc(data, timepoint_weights, subject_weights=subject_weights) 135 136 /usr/local/lib/python3.6/site-packages/timecorr/helpers.py in wisfc(data, timepoint_weights, subject_weights) 109 axis=2, weights=subject_weights[s, other_inds]) 110 --> 111 next = wcorr(a, b, timepoint_weights) 112 for t in np.arange(T): 113 x = next[:, :, t] /usr/local/lib/python3.6/site-packages/timecorr/helpers.py in wcorr(a, b, weights, tol) 58 mb, varb, diffs_b = weighted_mean_var_diffs(b, weights[:, t]) 59 ---> 60 alpha = np.dot(diffs_a.T, diffs_b) 61 beta = np.dot(vara[:, np.newaxis], varb[np.newaxis, :]) 62 ValueError: shapes (100,714) and (691,100) not aligned: 714 (dim 1) != 691 (dim 0)
fixed!
I'm getting the following error when I set
weights_function=laplace_weights
: