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Anaconda issue tracking
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Anaconda not responding after upgrade to Big Sur #12179

Open melvynsimnus opened 3 years ago

melvynsimnus commented 3 years ago

Actual Behavior

I have upgraded to Big Sur and now I am unable to run anaconda. It gets stuck at initializing. I have following the instructions I could find from the web, including updates, total removal and reinstallation. However, it still at stuck at initialization.

Expected Behavior

I would be able to the see a menu of programs to choose from.

Steps to Reproduce

I have following the instructions I could find from the web, including updates, total removal and reinstallation. However, it still at stuck at initialization.

Anaconda or Miniconda version:

Anaconda3-2020.11-MacOSX-x86_64

Operating System:
conda info
     active environment : base
    active env location : /Users/melvyn/opt/anaconda3
            shell level : 1
       user config file : /Users/melvyn/.condarc
 populated config files : 
          conda version : 4.9.2
    conda-build version : 3.20.5
         python version : 3.8.5.final.0
       virtual packages : __osx=10.16=0
                          __unix=0=0
                          __archspec=1=x86_64
       base environment : /Users/melvyn/opt/anaconda3  (writable)
           channel URLs : https://repo.anaconda.com/pkgs/main/osx-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/osx-64
                          https://repo.anaconda.com/pkgs/r/noarch
          package cache : /Users/melvyn/opt/anaconda3/pkgs
                          /Users/melvyn/.conda/pkgs
       envs directories : /Users/melvyn/opt/anaconda3/envs
                          /Users/melvyn/.conda/envs
               platform : osx-64
             user-agent : conda/4.9.2 requests/2.24.0 CPython/3.8.5 Darwin/20.1.0 OSX/10.16
                UID:GID : 501:20
             netrc file : None
           offline mode : False

conda list --show-channel-urls
``` # packages in environment at /Users/melvyn/opt/anaconda3: # # Name Version Build Channel _anaconda_depends 2020.07 py38_0 defaults _ipyw_jlab_nb_ext_conf 0.1.0 py38_0 defaults alabaster 0.7.12 py_0 defaults anaconda custom py38_1 defaults anaconda-client 1.7.2 py38_0 defaults anaconda-navigator 1.10.0 py38_0 defaults anaconda-project 0.8.4 py_0 defaults applaunchservices 0.2.1 py_0 defaults appnope 0.1.0 py38_1001 defaults appscript 1.1.1 py38haf1e3a3_0 defaults argh 0.26.2 py38_0 defaults argon2-cffi 20.1.0 py38haf1e3a3_1 defaults asn1crypto 1.4.0 py_0 defaults astroid 2.4.2 py38_0 defaults astropy 4.0.2 py38haf1e3a3_0 defaults async_generator 1.10 py_0 defaults atomicwrites 1.4.0 py_0 defaults attrs 20.3.0 pyhd3eb1b0_0 defaults autopep8 1.5.4 py_0 defaults babel 2.8.1 pyhd3eb1b0_0 defaults backcall 0.2.0 py_0 defaults backports 1.0 pyhd3eb1b0_2 defaults backports.functools_lru_cache 1.6.1 pyhd3eb1b0_0 defaults backports.shutil_get_terminal_size 1.0.0 py38_2 defaults backports.tempfile 1.0 py_1 defaults backports.weakref 1.0.post1 py_1 defaults beautifulsoup4 4.9.3 pyhb0f4dca_0 defaults bitarray 1.6.1 py38h9ed2024_0 defaults bkcharts 0.2 py38_0 defaults blas 1.0 mkl defaults bleach 3.2.1 py_0 defaults blosc 1.20.1 hab81aa3_0 defaults bokeh 2.2.3 py38_0 defaults boto 2.49.0 py38_0 defaults bottleneck 1.3.2 py38hf1fa96c_1 defaults brotlipy 0.7.0 py38h9ed2024_1003 defaults bzip2 1.0.8 h1de35cc_0 defaults ca-certificates 2020.10.14 0 defaults certifi 2020.11.8 py38hecd8cb5_0 defaults cffi 1.14.3 py38h2125817_2 defaults chardet 3.0.4 py38hecd8cb5_1003 defaults click 7.1.2 py_0 defaults cloudpickle 1.6.0 py_0 defaults clyent 1.2.2 py38_1 defaults colorama 0.4.4 py_0 defaults conda 4.9.2 py38hecd8cb5_0 defaults conda-build 3.20.5 py38_1 defaults conda-env 2.6.0 1 defaults conda-package-handling 1.7.2 py38h22f3db7_0 defaults conda-verify 3.4.2 py_1 defaults contextlib2 0.6.0.post1 py_0 defaults cryptography 3.2.1 py38hbcfaee0_1 defaults curl 7.71.1 hb0a8c7a_1 defaults cycler 0.10.0 py38_0 defaults cython 0.29.21 py38h23ab428_0 defaults cytoolz 0.11.0 py38haf1e3a3_0 defaults dask 2.30.0 py_0 defaults dask-core 2.30.0 py_0 defaults dbus 1.13.18 h18a8e69_0 defaults decorator 4.4.2 py_0 defaults defusedxml 0.6.0 py_0 defaults diff-match-patch 20200713 py_0 defaults distributed 2.30.1 py38hecd8cb5_0 defaults docutils 0.16 py38_1 defaults entrypoints 0.3 py38_0 defaults et_xmlfile 1.0.1 py_1001 defaults expat 2.2.10 hb1e8313_2 defaults fastcache 1.1.0 py38h1de35cc_0 defaults filelock 3.0.12 py_0 defaults flake8 3.8.4 py_0 defaults flask 1.1.2 py_0 defaults freetype 2.10.4 ha233b18_0 defaults fsspec 0.8.3 py_0 defaults future 0.18.2 py38_1 defaults get_terminal_size 1.0.0 h7520d66_0 defaults gettext 0.19.8.1 hb0f4f8b_2 defaults gevent 20.9.0 py38haf1e3a3_0 defaults glib 2.66.1 h9bbe63b_0 defaults glob2 0.7 py_0 defaults gmp 6.1.2 hb37e062_1 defaults gmpy2 2.0.8 py38h6ef4df4_3 defaults greenlet 0.4.17 py38haf1e3a3_0 defaults h5py 2.10.0 py38h3134771_0 defaults hdf5 1.10.4 hfa1e0ec_0 defaults heapdict 1.0.1 py_0 defaults html5lib 1.1 py_0 defaults icu 58.2 h0a44026_3 defaults idna 2.10 py_0 defaults imageio 2.9.0 py_0 defaults imagesize 1.2.0 py_0 defaults importlib-metadata 2.0.0 py_1 defaults importlib_metadata 2.0.0 1 defaults iniconfig 1.1.1 py_0 defaults intel-openmp 2019.4 233 defaults intervaltree 3.1.0 py_0 defaults ipykernel 5.3.4 py38h5ca1d4c_0 defaults ipython 7.19.0 py38h01d92e1_0 defaults ipython_genutils 0.2.0 py38_0 defaults ipywidgets 7.5.1 py_1 defaults isort 5.6.4 py_0 defaults itsdangerous 1.1.0 py_0 defaults jbig 2.1 h4d881f8_0 defaults jdcal 1.4.1 py_0 defaults jedi 0.17.1 py38_0 defaults jinja2 2.11.2 py_0 defaults joblib 0.17.0 py_0 defaults jpeg 9b he5867d9_2 defaults json5 0.9.5 py_0 defaults jsonschema 3.2.0 py_2 defaults jupyter 1.0.0 py38_7 defaults jupyter_client 6.1.7 py_0 defaults jupyter_console 6.2.0 py_0 defaults jupyter_core 4.7.0 py38hecd8cb5_0 defaults jupyterlab 2.2.6 py_0 defaults jupyterlab_pygments 0.1.2 py_0 defaults jupyterlab_server 1.2.0 py_0 defaults keyring 21.4.0 py38_1 defaults kiwisolver 1.3.0 py38h23ab428_0 defaults krb5 1.18.2 h75d18d8_0 defaults lazy-object-proxy 1.4.3 py38h1de35cc_0 defaults lcms2 2.11 h92f6f08_0 defaults libarchive 3.4.2 haa3ed63_0 defaults libcurl 7.71.1 h8a08a2b_1 defaults libcxx 10.0.0 1 defaults libedit 3.1.20191231 h1de35cc_1 defaults libffi 3.3 hb1e8313_2 defaults libgfortran 3.0.1 h93005f0_2 defaults libiconv 1.16 h1de35cc_0 defaults liblief 0.10.1 h0a44026_0 defaults libllvm10 10.0.1 h76017ad_5 defaults libllvm9 9.0.1 h21ff451_1 defaults libpng 1.6.37 ha441bb4_0 defaults libsodium 1.0.18 h1de35cc_0 defaults libspatialindex 1.9.3 h0a44026_0 defaults libssh2 1.9.0 ha12b0ac_1 defaults libtiff 4.1.0 hcb84e12_1 defaults libxml2 2.9.10 h7cdb67c_3 defaults libxslt 1.1.34 h83b36ba_0 defaults llvm-openmp 10.0.0 h28b9765_0 defaults llvmlite 0.34.0 py38h739e7dc_4 defaults locket 0.2.0 py38_1 defaults lxml 4.6.1 py38h63b7cb6_0 defaults lz4-c 1.9.2 h79c402e_3 defaults lzo 2.10 haf1e3a3_2 defaults markupsafe 1.1.1 py38h1de35cc_1 defaults matplotlib 3.3.2 0 defaults matplotlib-base 3.3.2 py38h181983e_0 defaults mccabe 0.6.1 py38_1 defaults mistune 0.8.4 py38h1de35cc_1001 defaults mkl 2019.4 233 defaults mkl-service 2.3.0 py38hfbe908c_0 defaults mkl_fft 1.2.0 py38hc64f4ea_0 defaults mkl_random 1.1.1 py38h959d312_0 defaults mock 4.0.2 py_0 defaults more-itertools 8.6.0 pyhd3eb1b0_0 defaults mpc 1.1.0 h6ef4df4_1 defaults mpfr 4.0.2 h9066e36_1 defaults mpmath 1.1.0 py38_0 defaults msgpack-python 1.0.0 py38h04f5b5a_1 defaults multipledispatch 0.6.0 py38_0 defaults navigator-updater 0.2.1 py38_0 defaults nbclient 0.5.1 py_0 defaults nbconvert 6.0.7 py38_0 defaults nbformat 5.0.8 py_0 defaults ncurses 6.2 h0a44026_1 defaults nest-asyncio 1.4.3 pyhd3eb1b0_0 defaults networkx 2.5 py_0 defaults nltk 3.5 py_0 defaults nose 1.3.7 py38_1004 defaults notebook 6.1.4 py38_0 defaults numba 0.51.2 py38h6440ff4_1 defaults numexpr 2.7.1 py38hce01a72_0 defaults numpy 1.19.2 py38h456fd55_0 defaults numpy-base 1.19.2 py38hcfb5961_0 defaults numpydoc 1.1.0 pyhd3eb1b0_1 defaults olefile 0.46 py_0 defaults openpyxl 3.0.5 py_0 defaults openssl 1.1.1h haf1e3a3_0 defaults packaging 20.4 py_0 defaults pandas 1.1.3 py38hb1e8313_0 defaults pandoc 2.11 h0dc7051_0 defaults pandocfilters 1.4.3 py38hecd8cb5_1 defaults parso 0.7.0 py_0 defaults partd 1.1.0 py_0 defaults path 15.0.0 py38_0 defaults path.py 12.5.0 0 defaults pathlib2 2.3.5 py38_1 defaults pathtools 0.1.2 py_1 defaults patsy 0.5.1 py38_0 defaults pcre 8.44 hb1e8313_0 defaults pep8 1.7.1 py38_0 defaults pexpect 4.8.0 pyhd3eb1b0_3 defaults pickleshare 0.7.5 py38_1001 defaults pillow 8.0.1 py38h5270095_0 defaults pip 20.2.4 py38hecd8cb5_0 defaults pkginfo 1.6.1 py38hecd8cb5_0 defaults pluggy 0.13.1 py38_0 defaults ply 3.11 py38_0 defaults prometheus_client 0.8.0 py_0 defaults prompt-toolkit 3.0.8 py_0 defaults prompt_toolkit 3.0.8 0 defaults psutil 5.7.2 py38haf1e3a3_0 defaults ptyprocess 0.6.0 pyhd3eb1b0_2 defaults py 1.9.0 py_0 defaults py-lief 0.10.1 py38haf313ee_0 defaults pycodestyle 2.6.0 py_0 defaults pycosat 0.6.3 py38h1de35cc_1 defaults pycparser 2.20 py_2 defaults pycurl 7.43.0.6 py38hddc9c9b_0 defaults pydocstyle 5.1.1 py_0 defaults pyflakes 2.2.0 py_0 defaults pygments 2.7.2 pyhd3eb1b0_0 defaults pylint 2.6.0 py38_0 defaults pyodbc 4.0.30 py38h0a44026_0 defaults pyopenssl 19.1.0 pyhd3eb1b0_1 defaults pyparsing 2.4.7 py_0 defaults pyqt 5.9.2 py38h655552a_2 defaults pyrsistent 0.17.3 py38haf1e3a3_0 defaults pysocks 1.7.1 py38_1 defaults pytables 3.6.1 py38h4727e94_0 defaults pytest 6.1.1 py38_0 defaults python 3.8.5 h26836e1_1 anaconda python-dateutil 2.8.1 py_0 defaults python-jsonrpc-server 0.4.0 py_0 defaults python-language-server 0.35.1 py_0 defaults python-libarchive-c 2.9 py_0 defaults python.app 2 py38_10 defaults pytz 2020.1 py_0 defaults pywavelets 1.1.1 py38haf1e3a3_2 defaults pyyaml 5.3.1 py38haf1e3a3_1 defaults pyzmq 19.0.2 py38hb1e8313_1 defaults qdarkstyle 2.8.1 py_0 defaults qt 5.9.7 h468cd18_1 defaults qtawesome 1.0.1 py_0 defaults qtconsole 4.7.7 py_0 defaults qtpy 1.9.0 py_0 defaults readline 8.0 h1de35cc_0 defaults regex 2020.10.15 py38haf1e3a3_0 defaults requests 2.24.0 py_0 defaults ripgrep 12.1.1 0 defaults rope 0.18.0 py_0 defaults rtree 0.9.4 py38_1 defaults ruamel_yaml 0.15.87 py38haf1e3a3_1 defaults scikit-image 0.17.2 py38h81aa140_0 defaults scikit-learn 0.23.2 py38h959d312_0 defaults scipy 1.5.2 py38h2515648_0 defaults seaborn 0.11.0 py_0 defaults send2trash 1.5.0 py38_0 defaults setuptools 50.3.1 py38hecd8cb5_1 defaults simplegeneric 0.8.1 py38_2 defaults singledispatch 3.4.0.3 py_1001 defaults sip 4.19.8 py38h0a44026_0 defaults six 1.15.0 py38hecd8cb5_0 defaults snappy 1.1.8 hb1e8313_0 defaults snowballstemmer 2.0.0 py_0 defaults sortedcollections 1.2.1 py_0 defaults sortedcontainers 2.2.2 py_0 defaults soupsieve 2.0.1 py_0 defaults sphinx 3.2.1 py_0 defaults sphinxcontrib 1.0 py38_1 defaults sphinxcontrib-applehelp 1.0.2 py_0 defaults sphinxcontrib-devhelp 1.0.2 py_0 defaults sphinxcontrib-htmlhelp 1.0.3 py_0 defaults sphinxcontrib-jsmath 1.0.1 py_0 defaults sphinxcontrib-qthelp 1.0.3 py_0 defaults sphinxcontrib-serializinghtml 1.1.4 py_0 defaults sphinxcontrib-websupport 1.2.4 py_0 defaults spyder 4.1.5 py38_0 defaults spyder-kernels 1.9.4 py38_0 defaults sqlalchemy 1.3.20 py38h9ed2024_0 defaults sqlite 3.33.0 hffcf06c_0 defaults statsmodels 0.12.0 py38haf1e3a3_0 defaults sympy 1.6.2 py38hecd8cb5_1 defaults tbb 2020.3 h879752b_0 defaults tblib 1.7.0 py_0 defaults terminado 0.9.1 py38_0 defaults testpath 0.4.4 py_0 defaults threadpoolctl 2.1.0 pyh5ca1d4c_0 defaults tifffile 2020.10.1 py38h0cf3a3e_2 defaults tk 8.6.10 hb0a8c7a_0 defaults toml 0.10.1 py_0 defaults toolz 0.11.1 py_0 defaults tornado 6.0.4 py38h1de35cc_1 defaults tqdm 4.51.0 pyhd3eb1b0_0 defaults traitlets 5.0.5 py_0 defaults typing_extensions 3.7.4.3 py_0 defaults ujson 4.0.1 py38hb1e8313_0 defaults unicodecsv 0.14.1 py38_0 defaults unixodbc 2.3.9 haf1e3a3_0 defaults urllib3 1.25.11 py_0 defaults watchdog 0.10.3 py38haf1e3a3_0 defaults wcwidth 0.2.5 py_0 defaults webencodings 0.5.1 py38_1 defaults werkzeug 1.0.1 py_0 defaults wheel 0.35.1 pyhd3eb1b0_0 defaults widgetsnbextension 3.5.1 py38_0 defaults wrapt 1.11.2 py38h1de35cc_0 defaults wurlitzer 2.0.1 py38_0 defaults xlrd 1.2.0 py_0 defaults xlsxwriter 1.3.7 py_0 defaults xlwings 0.20.8 py38_0 defaults xlwt 1.3.0 py38_0 defaults xmltodict 0.12.0 py_0 defaults xz 5.2.5 h1de35cc_0 defaults yaml 0.2.5 haf1e3a3_0 defaults yapf 0.30.0 py_0 defaults zeromq 4.3.3 hb1e8313_3 defaults zict 2.0.0 py_0 defaults zipp 3.4.0 pyhd3eb1b0_0 defaults zlib 1.2.11 h1de35cc_3 defaults zope 1.0 py38_1 defaults zope.event 4.5.0 py38_0 defaults zope.interface 5.1.2 py38haf1e3a3_0 defaults zstd 1.4.5 h41d2c2f_0 defaults ```
ZhuZheart98 commented 3 years ago

I reinstall the anaconda in Big Sur 11.1, it does good.First, I suggest you that open terminal.app, then input 'anaconda-navigator', wait a moment, then , it will open.