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version for package ensembl-vep not updated #12259

Closed Bio-Raf closed 3 years ago

Bio-Raf commented 3 years ago

Actual Behavior

I install ensembl-vep from bioconda but the version is not the indicated 102.0, but 89.9

Expected Behavior

the syntax has changed a lot from the old to the new version I would like at least to get v98.3

Steps to Reproduce

all the following comands gave me v88.9

conda install -c bioconda ensembl-vep conda install -c bioconda ensembl-vep=102.0 conda update ensembl-vep

Anaconda or Miniconda version:

miniconda3

----------------------------------

ENSEMBL VARIANT EFFECT PREDICTOR

----------------------------------

Versions: ensembl : 88.c3093a6 ensembl-funcgen : 88.3e63130 ensembl-io : 88.277fe7c ensembl-variation : 88.85fee8f ensembl-vep : 88.9

Operating System:

NAME="Ubuntu" VERSION="18.04.5 LTS (Bionic Beaver)" ID=ubuntu ID_LIKE=debian PRETTY_NAME="Ubuntu 18.04.5 LTS" VERSION_ID="18.04"

conda info
``` active environment : base active env location : /home/rafael/miniconda3 shell level : 1 user config file : /home/rafael/.condarc populated config files : /home/rafael/.condarc conda version : 4.9.2 conda-build version : not installed python version : 3.8.5.final.0 virtual packages : __glibc=2.27=0 __unix=0=0 __archspec=1=x86_64 base environment : /home/rafael/miniconda3 (writable) channel URLs : https://conda.anaconda.org/conda-forge/linux-64 https://conda.anaconda.org/conda-forge/noarch https://conda.anaconda.org/bioconda/linux-64 https://conda.anaconda.org/bioconda/noarch https://repo.anaconda.com/pkgs/main/linux-64 https://repo.anaconda.com/pkgs/main/noarch https://repo.anaconda.com/pkgs/r/linux-64 https://repo.anaconda.com/pkgs/r/noarch package cache : /home/rafael/miniconda3/pkgs /home/rafael/.conda/pkgs envs directories : /home/rafael/miniconda3/envs /home/rafael/.conda/envs platform : linux-64 user-agent : conda/4.9.2 requests/2.25.1 CPython/3.8.5 Linux/5.4.0-64-generic ubuntu/18.04.5 glibc/2.27 UID:GID : 1000:1000 netrc file : None offline mode : False ```
conda list --show-channel-urls
``` Name Version Build Channel _libgcc_mutex 0.1 conda_forge conda-forge _openmp_mutex 4.5 1_gnu conda-forge _r-mutex 1.0.1 anacondar_1 conda-forge atk-1.0 2.36.0 h3371d22_4 conda-forge bedtools 2.30.0 hc088bd4_0 bioconda binutils_impl_linux-64 2.35.1 h193b22a_2 conda-forge binutils_linux-64 2.35 hc3fd857_29 conda-forge bioconductor-annotationdbi 1.48.0 r36_0 bioconda bioconductor-biobase 2.46.0 r36h516909a_0 bioconda bioconductor-biocfilecache 1.10.0 r36_0 bioconda bioconductor-biocgenerics 0.32.0 r36_0 bioconda bioconductor-biocparallel 1.20.0 r36he1b5a44_0 bioconda bioconductor-biomart 2.42.0 r36_0 bioconda bioconductor-biostrings 2.54.0 r36h516909a_0 bioconda bioconductor-bsgenome 1.54.0 r36_0 bioconda bioconductor-delayedarray 0.12.0 r36h516909a_0 bioconda bioconductor-genomeinfodb 1.22.0 r36_0 bioconda bioconductor-genomeinfodbdata 1.2.2 r36_0 bioconda bioconductor-genomicalignments 1.22.0 r36h516909a_0 bioconda bioconductor-genomicfeatures 1.38.0 r36_0 bioconda bioconductor-genomicranges 1.38.0 r36h516909a_0 bioconda bioconductor-iranges 2.20.0 r36h516909a_0 bioconda bioconductor-org.hs.eg.db 3.10.0 r36_0 bioconda bioconductor-rhtslib 1.18.0 r36hdb70ac9_1 bioconda bioconductor-rsamtools 2.2.0 r36he1b5a44_0 bioconda bioconductor-rtracklayer 1.46.0 r36h516909a_0 bioconda bioconductor-s4vectors 0.24.0 r36h516909a_0 bioconda bioconductor-summarizedexperiment 1.16.0 r36_0 bioconda bioconductor-variantannotation 1.32.0 r36h516909a_0 bioconda bioconductor-xvector 0.26.0 r36h516909a_0 bioconda bioconductor-zlibbioc 1.32.0 r36h516909a_0 bioconda brotlipy 0.7.0 py38h497a2fe_1001 conda-forge bwa 0.7.17 hed695b0_7 bioconda bwidget 1.9.14 ha770c72_0 conda-forge bzip2 1.0.8 h7f98852_4 conda-forge c-ares 1.17.1 h36c2ea0_0 conda-forge ca-certificates 2020.12.5 ha878542_0 conda-forge cairo 1.16.0 h7979940_1007 conda-forge certifi 2020.12.5 py38h578d9bd_1 conda-forge cffi 1.14.4 py38ha65f79e_1 conda-forge chardet 4.0.0 py38h578d9bd_1 conda-forge click 7.1.2 pyh9f0ad1d_0 conda-forge coloredlogs 15.0 py38h578d9bd_0 conda-forge conda 4.9.2 py38h578d9bd_0 conda-forge conda-package-handling 1.7.2 py38h8df0ef7_0 conda-forge cryptography 3.3.1 py38h2b97feb_1 conda-forge curl 7.71.1 he644dc0_8 conda-forge cycler 0.10.0 py_2 conda-forge cyvcf2 0.30.4 py38h00803a1_0 bioconda decorator 4.4.2 py_0 conda-forge ensembl-vep 88.9 0 bioconda expat 2.2.10 h9c3ff4c_0 conda-forge fastqc 0.11.9 0 bioconda font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge font-ttf-inconsolata 2.001 hab24e00_0 conda-forge font-ttf-source-code-pro 2.030 hab24e00_0 conda-forge font-ttf-ubuntu 0.83 hab24e00_0 conda-forge fontconfig 2.13.1 hba837de_1004 conda-forge fonts-conda-ecosystem 1 0 conda-forge fonts-conda-forge 1 0 conda-forge freetype 2.10.4 h0708190_1 conda-forge fribidi 1.0.10 h36c2ea0_0 conda-forge gatk 3.8 10 bioconda gatk4 4.1.9.0 py39_0 bioconda gcc_impl_linux-64 9.3.0 h70c0ae5_18 conda-forge gcc_linux-64 9.3.0 h7247604_29 conda-forge gdk-pixbuf 2.42.2 h0c95a7a_2 conda-forge gettext 0.19.8.1 h0b5b191_1005 conda-forge gfortran_impl_linux-64 9.3.0 hc4a2995_18 conda-forge gfortran_linux-64 9.3.0 ha1c937c_29 conda-forge giflib 5.2.1 h36c2ea0_2 conda-forge graphite2 1.3.13 h58526e2_1001 conda-forge graphviz 2.42.3 h6939c30_2 conda-forge gsl 2.6 he838d99_2 conda-forge gtk2 2.24.33 hab0c2f8_0 conda-forge gts 0.7.6 h64030ff_2 conda-forge gxx_impl_linux-64 9.3.0 hd87eabc_18 conda-forge gxx_linux-64 9.3.0 h0d07fa4_29 conda-forge harfbuzz 2.7.4 h5cf4720_0 conda-forge htslib 1.10.2 hd3b49d5_1 bioconda humanfriendly 9.1 py38h578d9bd_0 conda-forge icu 68.1 h58526e2_0 conda-forge idna 2.10 pyh9f0ad1d_0 conda-forge joblib 1.0.0 pyhd8ed1ab_0 conda-forge jpeg 9d h36c2ea0_0 conda-forge kernel-headers_linux-64 2.6.32 h77966d4_13 conda-forge kiwisolver 1.3.1 py38h1fd1430_1 conda-forge krb5 1.17.2 h926e7f8_0 conda-forge lcms2 2.11 hcbb858e_1 conda-forge ld_impl_linux-64 2.35.1 hea4e1c9_2 conda-forge libblas 3.9.0 7_openblas conda-forge libcblas 3.9.0 7_openblas conda-forge libcurl 7.71.1 hcdd3856_8 conda-forge libdb 6.2.32 h9c3ff4c_0 conda-forge libdeflate 1.6 h516909a_0 conda-forge libedit 3.1.20191231 he28a2e2_2 conda-forge libev 4.33 h516909a_1 conda-forge libffi 3.3 h58526e2_2 conda-forge libgcc 5.2.0 0 conda-forge libgcc-devel_linux-64 9.3.0 h7864c58_18 conda-forge libgcc-ng 9.3.0 h2828fa1_18 conda-forge libgd 2.3.0 h47910db_1 conda-forge libgfortran-ng 9.3.0 hff62375_18 conda-forge libgfortran5 9.3.0 hff62375_18 conda-forge libglib 2.66.4 h748fe8e_2 conda-forge libgomp 9.3.0 h2828fa1_18 conda-forge libiconv 1.16 h516909a_0 conda-forge liblapack 3.9.0 7_openblas conda-forge libnghttp2 1.41.0 h8cfc5f6_2 conda-forge libopenblas 0.3.12 pthreads_h4812303_1 conda-forge libpng 1.6.37 h21135ba_2 conda-forge libssh2 1.9.0 hab1572f_5 conda-forge libstdcxx-devel_linux-64 9.3.0 hb016644_18 conda-forge libstdcxx-ng 9.3.0 h6de172a_18 conda-forge libtiff 4.2.0 hdc55705_0 conda-forge libtool 2.4.6 h58526e2_1007 conda-forge libuuid 2.32.1 h7f98852_1000 conda-forge libwebp 1.2.0 h3452ae3_0 conda-forge libwebp-base 1.2.0 h7f98852_0 conda-forge libxcb 1.13 h7f98852_1003 conda-forge libxml2 2.9.10 h72842e0_3 conda-forge libxslt 1.1.33 h15afd5d_2 conda-forge lz4-c 1.9.3 h9c3ff4c_0 conda-forge make 4.3 hd18ef5c_1 conda-forge matplotlib-base 3.3.4 py38h0efea84_0 conda-forge mysql-connector-c 6.1.11 h6eb9d5d_1007 conda-forge ncurses 6.2 h58526e2_4 conda-forge networkx 2.5 py_0 conda-forge numpy 1.20.0 py38h18fd61f_0 conda-forge olefile 0.46 pyh9f0ad1d_1 conda-forge openjdk 8.0.265 h516909a_0 conda-forge openssl 1.1.1i h7f98852_0 conda-forge pandas 1.2.1 py38h51da96c_0 conda-forge pango 1.42.4 h69149e4_5 conda-forge patsy 0.5.1 py_0 conda-forge pcre 8.44 he1b5a44_0 conda-forge peddy 0.4.7 pyh864c0ab_0 bioconda perl 5.26.2 h36c2ea0_1008 conda-forge perl-aceperl 1.92 pl526_2 bioconda perl-algorithm-diff 1.1903 pl526_2 bioconda perl-algorithm-munkres 0.08 pl526_1 bioconda perl-apache-test 1.40 pl526_1 bioconda perl-app-cpanminus 1.7044 pl526_1 bioconda perl-appconfig 1.71 pl526_1 bioconda perl-array-compare 3.0.1 pl526_1 bioconda perl-autoloader 5.74 pl526_2 bioconda perl-base 2.23 pl526_1 bioconda perl-bio-asn1-entrezgene 1.73 pl526_1 bioconda perl-bio-db-hts 3.01 pl526hee625c5_1 bioconda perl-bio-featureio 1.6.905 pl526_2 bioconda perl-bio-phylo 0.58 pl526_2 bioconda perl-bio-samtools 1.43 pl526h1341992_1 bioconda perl-bioperl 1.6.924 6 bioconda perl-bioperl-core 1.007002 pl526_2 bioconda perl-bioperl-run 1.007002 pl526_4 bioconda perl-business-isbn 3.004 pl526_0 bioconda perl-business-isbn-data 20140910.003 pl526_0 bioconda perl-cache-cache 1.08 pl526_0 bioconda perl-capture-tiny 0.48 pl526_0 bioconda perl-carp 1.38 pl526_3 bioconda perl-cgi 4.44 pl526h14c3975_1 bioconda perl-class-data-inheritable 0.08 pl526_1 bioconda perl-class-inspector 1.34 pl526_0 bioconda perl-class-load 0.25 pl526_0 bioconda perl-class-load-xs 0.10 pl526h6bb024c_2 bioconda perl-class-method-modifiers 2.12 pl526_0 bioconda perl-clone 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perl-dist-checkconflicts 0.11 pl526_2 bioconda perl-dynaloader 1.25 pl526_1 bioconda perl-email-date-format 1.005 pl526_2 bioconda perl-encode 2.88 pl526_1 bioconda perl-encode-locale 1.05 pl526_6 bioconda perl-error 0.17027 pl526_1 bioconda perl-eval-closure 0.14 pl526h6bb024c_4 bioconda perl-exception-class 1.44 pl526_0 bioconda perl-exporter 5.72 pl526_1 bioconda perl-exporter-tiny 1.002001 pl526_0 bioconda perl-extutils-makemaker 7.36 pl526_1 bioconda perl-file-listing 6.04 pl526_1 bioconda perl-file-path 2.16 pl526_0 bioconda perl-file-slurp-tiny 0.004 pl526_1 bioconda perl-file-sort 1.01 pl526_2 bioconda perl-file-temp 0.2304 pl526_2 bioconda perl-file-which 1.23 pl526_0 bioconda perl-font-afm 1.20 pl526_2 bioconda perl-font-ttf 1.06 pl526_0 bioconda perl-gd 2.68 pl526he941832_0 bioconda perl-getopt-long 2.50 pl526_1 bioconda perl-graph 0.9704 pl526_1 bioconda perl-graphviz 2.24 pl526h734ff71_0 bioconda perl-html-element-extended 1.18 pl526_1 bioconda perl-html-entities-numbered 0.04 pl526_1 bioconda perl-html-formatter 2.16 pl526_0 bioconda perl-html-parser 3.72 pl526h6bb024c_5 bioconda perl-html-tableextract 2.13 pl526_2 bioconda perl-html-tagset 3.20 pl526_3 bioconda perl-html-tidy 1.60 pl526_0 bioconda perl-html-tree 5.07 pl526_1 bioconda perl-html-treebuilder-xpath 0.14 pl526_1 bioconda perl-http-cookies 6.04 pl526_0 bioconda perl-http-daemon 6.01 pl526_1 bioconda perl-http-date 6.02 pl526_3 bioconda perl-http-message 6.18 pl526_0 bioconda perl-http-negotiate 6.01 pl526_3 bioconda perl-image-info 1.38 pl526_1 bioconda perl-image-size 3.300 pl526_2 bioconda perl-io-compress 2.087 pl526he1b5a44_0 bioconda perl-io-html 1.001 pl526_2 bioconda perl-io-sessiondata 1.03 pl526_1 bioconda perl-io-socket-ssl 2.066 pl526_0 bioconda perl-io-string 1.08 pl526_3 bioconda perl-io-stringy 2.111 pl526_1 bioconda perl-io-tty 1.12 pl526_1 bioconda perl-ipc-run 20180523.0 pl526_0 bioconda perl-ipc-sharelite 0.17 pl526h6bb024c_1 bioconda perl-jcode 2.07 pl526_2 bioconda perl-json 4.02 pl526_0 bioconda perl-json-xs 2.34 pl526h6bb024c_3 bioconda perl-lib 0.63 pl526_1 bioconda perl-libwww-perl 6.39 pl526_0 bioconda perl-libxml-perl 0.08 pl526_2 bioconda perl-list-moreutils 0.428 pl526_1 bioconda perl-list-moreutils-xs 0.428 pl526_0 bioconda perl-lwp-mediatypes 6.04 pl526_0 bioconda perl-lwp-protocol-https 6.07 pl526_4 bioconda perl-lwp-simple 6.15 pl526h470a237_4 bioconda perl-mailtools 2.21 pl526_0 bioconda perl-math-cdf 0.1 pl526h14c3975_5 bioconda perl-math-derivative 1.01 pl526_0 bioconda perl-math-random 0.72 pl526h14c3975_2 bioconda perl-math-spline 0.02 pl526_2 bioconda perl-mime-base64 3.15 pl526_1 bioconda perl-mime-lite 3.030 pl526_1 bioconda perl-mime-tools 5.508 pl526_1 bioconda perl-mime-types 2.17 pl526_0 bioconda perl-mldbm 2.05 pl526_1 bioconda perl-module-implementation 0.09 pl526_2 bioconda perl-module-runtime 0.016 pl526_1 bioconda perl-module-runtime-conflicts 0.003 pl526_0 bioconda perl-moo 2.003004 pl526_0 bioconda perl-moose 2.2011 pl526hf484d3e_1 bioconda perl-mozilla-ca 20180117 pl526_1 bioconda perl-mro-compat 0.13 pl526_0 bioconda perl-net-http 6.19 pl526_0 bioconda perl-net-ssleay 1.88 pl526h90d6eec_0 bioconda perl-ntlm 1.09 pl526_4 bioconda perl-ole-storage_lite 0.19 pl526_3 bioconda perl-package-deprecationmanager 0.17 pl526_0 bioconda perl-package-stash 0.38 pl526hf484d3e_1 bioconda perl-package-stash-xs 0.28 pl526hf484d3e_1 bioconda perl-params-util 1.07 pl526h6bb024c_4 bioconda perl-parent 0.236 pl526_1 bioconda perl-parse-recdescent 1.967015 pl526_0 bioconda perl-pathtools 3.75 pl526h14c3975_1 bioconda perl-pdf-api2 2.035 pl526_0 bioconda perl-perlio-gzip 0.20 pl526h84994c4_1 bioconda perl-pod-escapes 1.07 pl526_1 bioconda perl-pod-usage 1.69 pl526_1 bioconda perl-postscript 0.06 pl526_2 bioconda perl-role-tiny 2.000008 pl526_0 bioconda perl-scalar-list-utils 1.52 pl526h516909a_0 bioconda perl-sereal 4.007 pl526_0 bioconda perl-sereal-decoder 4.007 pl526h14c3975_0 bioconda perl-sereal-encoder 4.007 pl526h14c3975_0 bioconda perl-set-intervaltree 0.12 pl526he1b5a44_0 bioconda perl-set-scalar 1.29 pl526_2 bioconda perl-soap-lite 1.19 pl526_1 bioconda perl-socket 2.027 pl526_1 bioconda perl-sort-naturally 1.03 pl526_2 bioconda perl-spreadsheet-parseexcel 0.65 pl526_2 bioconda perl-spreadsheet-writeexcel 2.40 pl526_2 bioconda perl-statistics-descriptive 3.0702 pl526_0 bioconda perl-storable 3.15 pl526h14c3975_0 bioconda perl-sub-exporter 0.987 pl526_2 bioconda perl-sub-exporter-progressive 0.001013 pl526_0 bioconda perl-sub-identify 0.14 pl526h14c3975_0 bioconda perl-sub-install 0.928 pl526_2 bioconda perl-sub-name 0.21 pl526_1 bioconda perl-sub-quote 2.006003 pl526_1 bioconda perl-sub-uplevel 0.2800 pl526h14c3975_2 bioconda perl-svg 2.84 pl526_0 bioconda perl-svg-graph 0.02 pl526_3 bioconda perl-task-weaken 1.06 pl526_0 bioconda perl-template-toolkit 2.26 pl526_1 bioconda perl-test 1.26 pl526_1 bioconda perl-test-deep 1.128 pl526_1 bioconda perl-test-differences 0.67 pl526_0 bioconda perl-test-exception 0.43 pl526_2 bioconda perl-test-harness 3.42 pl526_0 bioconda perl-test-leaktrace 0.16 pl526h14c3975_2 bioconda perl-test-most 0.35 pl526_0 bioconda perl-test-requiresinternet 0.05 pl526_0 bioconda perl-test-warn 0.36 pl526_1 bioconda perl-text-diff 1.45 pl526_0 bioconda perl-threaded 5.26.0 0 bioconda perl-tie-ixhash 1.23 pl526_2 bioconda perl-time-hires 1.9760 pl526h14c3975_1 bioconda perl-time-local 1.28 pl526_1 bioconda perl-timedate 2.30 pl526_1 bioconda perl-tree-dag_node 1.31 pl526_0 bioconda perl-try-tiny 0.30 pl526_1 bioconda perl-type-tiny 1.004004 pl526_0 bioconda perl-types-serialiser 1.0 pl526_2 bioconda perl-unicode-map 0.112 pl526h6bb024c_3 bioconda perl-uri 1.76 pl526_0 bioconda perl-www-robotrules 6.02 pl526_3 bioconda perl-xml-dom 1.46 pl526_0 bioconda perl-xml-dom-xpath 0.14 pl526_1 bioconda perl-xml-filter-buffertext 1.01 pl526_2 bioconda perl-xml-libxml 2.0132 pl526h7ec2d77_1 bioconda perl-xml-libxslt 1.94 pl526_1 bioconda perl-xml-namespacesupport 1.12 pl526_0 bioconda perl-xml-parser 2.44_01 pl526ha1d75be_1002 conda-forge perl-xml-regexp 0.04 pl526_2 bioconda perl-xml-sax 1.02 pl526_0 bioconda perl-xml-sax-base 1.09 pl526_0 bioconda perl-xml-sax-expat 0.51 pl526_3 bioconda perl-xml-sax-writer 0.57 pl526_0 bioconda perl-xml-simple 2.25 pl526_1 bioconda perl-xml-twig 3.52 pl526_2 bioconda perl-xml-writer 0.625 pl526_2 bioconda perl-xml-xpath 1.44 pl526_0 bioconda perl-xml-xpathengine 0.14 pl526_2 bioconda perl-xsloader 0.24 pl526_0 bioconda perl-yaml 1.29 pl526_0 bioconda picard 2.18.29 0 bioconda pillow 8.1.0 py38h357d4e7_1 conda-forge pip 21.0.1 pyhd8ed1ab_0 conda-forge pixman 0.40.0 h36c2ea0_0 conda-forge pthread-stubs 0.4 h36c2ea0_1001 conda-forge pycosat 0.6.3 py38h497a2fe_1006 conda-forge pycparser 2.20 pyh9f0ad1d_2 conda-forge pyopenssl 20.0.1 pyhd8ed1ab_0 conda-forge pyparsing 2.4.7 pyh9f0ad1d_0 conda-forge pysocks 1.7.1 py38h578d9bd_3 conda-forge python 3.8.5 h7579374_1 defaults python-dateutil 2.8.1 py_0 conda-forge python_abi 3.8 1_cp38 conda-forge pytz 2020.5 pyhd8ed1ab_0 conda-forge qualimap 2.2.2a 1 bioconda r-askpass 1.1 r36hcdcec82_2 conda-forge r-assertthat 0.2.1 r36h6115d3f_2 conda-forge r-backports 1.2.1 r36hcfec24a_0 conda-forge r-base 3.6.3 hd23ff56_6 conda-forge r-bh 1.75.0_0 r36hc72bb7e_0 conda-forge r-bit 4.0.4 r36hcdcec82_0 conda-forge r-bit64 4.0.5 r36hcdcec82_0 conda-forge r-bitops 1.0_6 r36hcdcec82_1004 conda-forge r-blob 1.2.1 r36h6115d3f_1 conda-forge r-brio 1.1.1 r36hcfec24a_0 conda-forge r-cachem 1.0.1 r36hcfec24a_0 conda-forge r-callr 3.5.1 r36h142f84f_0 conda-forge r-catools 1.18.1 r36h03ef668_0 conda-forge r-cli 2.3.0 r36hc72bb7e_0 conda-forge r-colorspace 2.0_0 r36h9e2df91_0 conda-forge r-crayon 1.4.0 r36hc72bb7e_0 conda-forge r-curl 4.3 r36hcdcec82_1 conda-forge r-dbi 1.1.1 r36hc72bb7e_0 conda-forge r-dbplyr 2.0.0 r36hc72bb7e_0 conda-forge r-desc 1.2.0 r36h6115d3f_1003 conda-forge r-diffobj 0.3.3 r36hcfec24a_0 conda-forge r-digest 0.6.27 r36h1b71b39_0 conda-forge r-dplyr 1.0.3 r36h03ef668_0 conda-forge r-ellipsis 0.3.1 r36hcdcec82_0 conda-forge r-evaluate 0.14 r36h6115d3f_2 conda-forge r-fansi 0.4.2 r36hcfec24a_0 conda-forge r-farver 2.0.3 r36h0357c0b_1 conda-forge r-fastmap 1.1.0 r36h03ef668_0 conda-forge r-formatr 1.7 r36h6115d3f_2 conda-forge r-futile.logger 1.4.3 r36h6115d3f_1003 conda-forge r-futile.options 1.0.1 r36h6115d3f_1002 conda-forge r-generics 0.1.0 r36hc72bb7e_0 conda-forge r-ggplot2 3.3.3 r36hc72bb7e_0 conda-forge r-glue 1.4.2 r36hcfec24a_0 conda-forge r-gplots 3.1.1 r36hc72bb7e_0 conda-forge r-gsalib 2.1 r36_1002 conda-forge r-gtable 0.3.0 r36h6115d3f_3 conda-forge r-gtools 3.8.2 r36hcdcec82_1 conda-forge r-hms 1.0.0 r36hc72bb7e_0 conda-forge r-httr 1.4.2 r36h6115d3f_0 conda-forge r-isoband 0.2.3 r36h03ef668_0 conda-forge r-jsonlite 1.7.2 r36hcfec24a_0 conda-forge r-kernsmooth 2.23_18 r36h742201e_0 conda-forge r-labeling 0.4.2 r36h142f84f_0 conda-forge r-lambda.r 1.2.4 r36h6115d3f_1 conda-forge r-lattice 0.20_41 r36hcfec24a_3 conda-forge r-lifecycle 0.2.0 r36h6115d3f_1 conda-forge r-magrittr 2.0.1 r36hcfec24a_1 conda-forge r-mass 7.3_53 r36hcfec24a_0 conda-forge r-matrix 1.3_2 r36he454529_0 conda-forge r-matrixstats 0.58.0 r36hcfec24a_0 conda-forge r-memoise 2.0.0 r36hc72bb7e_0 conda-forge r-mgcv 1.8_33 r36h7fa42b6_0 conda-forge r-mime 0.9 r36hcfec24a_1 conda-forge r-munsell 0.5.0 r36h6115d3f_1003 conda-forge r-nlme 3.1_151 r36h859d828_0 conda-forge r-openssl 1.4.3 r36he5c4762_0 conda-forge r-pillar 1.4.7 r36hc72bb7e_0 conda-forge r-pkgbuild 1.2.0 r36hc72bb7e_0 conda-forge r-pkgconfig 2.0.3 r36h6115d3f_1 conda-forge r-pkgload 1.1.0 r36h0357c0b_0 conda-forge r-plogr 0.2.0 r36h6115d3f_1003 conda-forge r-plyr 1.8.6 r36h0357c0b_1 conda-forge r-praise 1.0.0 r36h6115d3f_1004 conda-forge r-prettyunits 1.1.1 r36h6115d3f_1 conda-forge r-processx 3.4.5 r36hcfec24a_0 conda-forge r-progress 1.2.2 r36h6115d3f_2 conda-forge r-ps 1.5.0 r36hcfec24a_0 conda-forge r-purrr 0.3.4 r36hcdcec82_1 conda-forge r-r6 2.5.0 r36hc72bb7e_0 conda-forge r-rappdirs 0.3.3 r36hcfec24a_0 conda-forge r-rcolorbrewer 1.1_2 r36h6115d3f_1003 conda-forge r-rcpp 1.0.6 r36h03ef668_0 conda-forge r-rcurl 1.98_1.2 r36hcdcec82_1 conda-forge r-rematch2 2.1.2 r36h6115d3f_1 conda-forge r-reshape 0.8.8 r36hcdcec82_2 conda-forge r-rlang 0.4.10 r36hcfec24a_0 conda-forge r-rprojroot 2.0.2 r36hc72bb7e_0 conda-forge r-rsqlite 2.2.3 r36h03ef668_0 conda-forge r-rstudioapi 0.13 r36hc72bb7e_0 conda-forge r-scales 1.1.1 r36h6115d3f_0 conda-forge r-snow 0.4_3 r36h6115d3f_1002 conda-forge r-stringi 1.5.3 r36hcabe038_1 conda-forge r-stringr 1.4.0 r36h6115d3f_2 conda-forge r-sys 3.4 r36hcdcec82_0 conda-forge r-testthat 3.0.1 r36h03ef668_0 conda-forge r-tibble 3.0.6 r36hcfec24a_0 conda-forge r-tidyselect 1.1.0 r36h6115d3f_0 conda-forge r-utf8 1.1.4 r36hcdcec82_1003 conda-forge r-vctrs 0.3.6 r36hcfec24a_0 conda-forge r-viridislite 0.3.0 r36h6115d3f_1003 conda-forge r-waldo 0.2.3 r36hc72bb7e_0 conda-forge r-withr 2.4.1 r36hc72bb7e_0 conda-forge r-xml 3.99_0.3 r36hcdcec82_1 conda-forge r-zeallot 0.1.0 r36h6115d3f_1002 conda-forge readline 8.0 he28a2e2_2 conda-forge requests 2.25.1 pyhd3deb0d_0 conda-forge ruamel_yaml 0.15.80 py38h497a2fe_1004 conda-forge samtools 1.10 h2e538c0_3 bioconda scikit-learn 0.24.1 py38h658cfdd_0 conda-forge scipy 1.6.0 py38hb2138dd_0 conda-forge seaborn 0.11.1 hd8ed1ab_1 conda-forge seaborn-base 0.11.1 pyhd8ed1ab_1 conda-forge sed 4.8 he412f7d_0 conda-forge setuptools 49.6.0 py38h578d9bd_3 conda-forge six 1.15.0 pyh9f0ad1d_0 conda-forge sqlite 3.34.0 h74cdb3f_0 conda-forge statsmodels 0.12.1 py38h5c078b8_2 conda-forge sysroot_linux-64 2.12 h77966d4_13 conda-forge tabix 0.2.6 ha92aebf_0 bioconda threadpoolctl 2.1.0 pyh5ca1d4c_0 conda-forge tidyp 1.04 h516909a_2 bioconda tk 8.6.10 h21135ba_1 conda-forge tktable 2.10 hb7b940f_3 conda-forge toolshed 0.4.6 pyh864c0ab_3 bioconda tornado 6.1 py38h497a2fe_1 conda-forge tqdm 4.56.0 pyhd8ed1ab_0 conda-forge trimmomatic 0.39 1 bioconda unzip 6.0 h7f98852_2 conda-forge urllib3 1.26.3 pyhd8ed1ab_0 conda-forge varscan 2.4.4 0 bioconda wheel 0.36.2 pyhd3deb0d_0 conda-forge xorg-kbproto 1.0.7 h7f98852_1002 conda-forge xorg-libice 1.0.10 h516909a_0 conda-forge xorg-libsm 1.2.3 h84519dc_1000 conda-forge xorg-libx11 1.6.12 h516909a_0 conda-forge xorg-libxau 1.0.9 h7f98852_0 conda-forge xorg-libxdmcp 1.1.3 h7f98852_0 conda-forge xorg-libxext 1.3.4 h516909a_0 conda-forge xorg-libxpm 3.5.13 h516909a_0 conda-forge xorg-libxrender 0.9.10 h516909a_1002 conda-forge xorg-libxt 1.1.5 h516909a_1003 conda-forge xorg-renderproto 0.11.1 h14c3975_1002 conda-forge xorg-xextproto 7.3.0 h7f98852_1002 conda-forge xorg-xproto 7.0.31 h7f98852_1007 conda-forge xz 5.2.5 h516909a_1 conda-forge yaml 0.2.5 h516909a_0 conda-forge zlib 1.2.11 h516909a_1010 conda-forge zstd 1.4.8 ha95c52a_1 conda-forge ```
csoja commented 3 years ago

This is not the right place for this question. If it a problem with the package itself (listed dependencies, etc.) - then you need to contact the bioconda folks directly. If it is a problem with conda, then it should be on the conda github issue tracker. I'm going to close it here as this is not a package built by Anaconda and the majority of the packages you have installed are from either conda-forge or bioconda.