kalefranz
commented
8 years ago @ilanschnell is there a new dependency we didn't grab?
Closed michaelaye closed 8 years ago
kalefranz
commented
8 years ago @ilanschnell is there a new dependency we didn't grab?
ilanschnell
commented
8 years ago I just tried (on OSX):
$ conda create -n bar python=3.5 ipython
...
The following NEW packages will be INSTALLED:
appnope: 0.1.0-py35_0
backports: 1.0-py35_0
decorator: 4.0.9-py35_0
get_terminal_size: 1.0.0-py35_0
ipython: 4.2.0-py35_1
ipython_genutils: 0.1.0-py35_0
openssl: 1.0.2h-1
path.py: 8.2.1-py35_0
pexpect: 4.0.1-py35_0
pickleshare: 0.7.2-py35_0
pip: 8.1.2-py35_0
ptyprocess: 0.5.1-py35_0
python: 3.5.1-0
python.app: 1.2-py35_4
readline: 6.2-2
setuptools: 22.0.5-py35_0
simplegeneric: 0.8.1-py35_1
sqlite: 3.13.0-0
tk: 8.5.18-0
traitlets: 4.2.1-py35_0
wheel: 0.29.0-py35_0
xz: 5.0.5-1
zlib: 1.2.8-3And then executing the installed ipython. All went fine.
@michaelaye, are you just using the default channel? Or are some of the packages installed from other locations? Are all dependencies installed into the environment? What is the output from conda list? Thanks
michaelaye
commented
8 years ago Did just that. Fails here. hrmpf :(
(stable)└─❱❱❱ conda create -n bar python=3.5 ipython 127 ⏎ +4091 22:34 ❰─┘
Fetching package metadata: ....
Solving package specifications: .........
Package plan for installation in environment /Users/klay6683/miniconda3/envs/bar:
The following NEW packages will be INSTALLED:
appnope: 0.1.0-py35_0
backports: 1.0-py35_0
decorator: 4.0.9-py35_0
get_terminal_size: 1.0.0-py35_0
ipython: 4.2.0-py35_1
ipython_genutils: 0.1.0-py35_0
openssl: 1.0.2h-1
path.py: 8.2.1-py35_0
pexpect: 4.0.1-py35_0
pickleshare: 0.7.2-py35_0
pip: 8.1.2-py35_0
ptyprocess: 0.5.1-py35_0
python: 3.5.1-0
python.app: 1.2-py35_4
readline: 6.2-2
setuptools: 22.0.5-py35_0
simplegeneric: 0.8.1-py35_1
sqlite: 3.13.0-0
tk: 8.5.18-0
traitlets: 4.2.1-py35_0
wheel: 0.29.0-py35_0
xz: 5.0.5-1
zlib: 1.2.8-3
Proceed ([y]/n)? y
Linking packages ...
[ COMPLETE ]|#######################################################################| 100%
#
# To activate this environment, use:
# $ source activate bar
#
# To deactivate this environment, use:
# $ source deactivate
#
┌─( ~/D/s/a/m/Tutorials λ:py3_summer | ✗ ✱ ◼ ea08826 )──────────────────────────────( @MacL2938 )─┐
(stable)└─❱❱❱ source activate bar +4092 22:34 ❰─┘
discarding /Users/klay6683/miniconda3/envs/stable/bin from PATH
prepending /Users/klay6683/miniconda3/envs/bar/bin to PATH
┌─( ~/D/s/a/m/Tutorials λ:py3_summer | ✗ ✱ ◼ ea08826 )──────────────────────────────( @MacL2938 )─┐
(bar)└─❱❱❱ ipython +4093 22:34 ❰─┘
Traceback (most recent call last):
File "/Users/klay6683/miniconda3/envs/bar/bin/ipython", line 4, in <module>
import IPython
File "/Users/klay6683/miniconda3/envs/bar/lib/python3.5/site-packages/IPython/__init__.py", line 48, in <module>
from .core.application import Application
File "/Users/klay6683/miniconda3/envs/bar/lib/python3.5/site-packages/IPython/core/application.py", line 24, in <module>
from IPython.core import release, crashhandler
File "/Users/klay6683/miniconda3/envs/bar/lib/python3.5/site-packages/IPython/core/crashhandler.py", line 28, in <module>
from IPython.core import ultratb
File "/Users/klay6683/miniconda3/envs/bar/lib/python3.5/site-packages/IPython/core/ultratb.py", line 117, in <module>
from IPython.core import debugger
File "/Users/klay6683/miniconda3/envs/bar/lib/python3.5/site-packages/IPython/core/debugger.py", line 35, in <module>
from IPython.utils import PyColorize, ulinecache
File "/Users/klay6683/miniconda3/envs/bar/lib/python3.5/site-packages/IPython/utils/PyColorize.py", line 57, in <module>
from .colorable import Colorable
ImportError: No module named 'IPython.utils.colorable'Note I test-installed the new IPython 5 betas before. But I kicked them off again, due to probs, and they obviously shouldn't mess with a fresh conda env. Unless, they left some ill-posed config file that now disturbs things?
Here's conda list:
(bar)└─❱❱❱ conda list 1 ⏎ +4094 22:38 ❰─┘
# packages in environment at /Users/klay6683/miniconda3/envs/bar:
#
appnope 0.1.0 py35_0 defaults
backports 1.0 py35_0 defaults
backports.shutil-get-terminal-size 1.0.0 <pip>
decorator 4.0.9 py35_0 defaults
get_terminal_size 1.0.0 py35_0 defaults
ipython 4.2.0 py35_1 defaults
ipython-genutils 0.1.0 <pip>
ipython_genutils 0.1.0 py35_0 defaults
openssl 1.0.2h 1 defaults
path.py 8.2.1 py35_0 defaults
pexpect 4.0.1 py35_0 defaults
pickleshare 0.7.2 py35_0 conda-forge
pip 8.1.2 py35_0 defaults
ptyprocess 0.5.1 py35_0 defaults
python 3.5.1 0 defaults
python-contrib-nbextensions alpha <pip>
python.app 1.2 py35_4 defaults
readline 6.2 2 <unknown>
setuptools 22.0.5 py35_0 defaults
simplegeneric 0.8.1 py35_1 defaults
sqlite 3.13.0 0 defaults
tk 8.5.18 0 <unknown>
traitlets 4.2.1 py35_0 defaults
wheel 0.29.0 py35_0 defaults
xz 5.0.5 1 defaults
zlib 1.2.8 3 defaultsI only use the default channel:
(bar)└─❱❱❱ conda config --get channels +4096 22:38 ❰─┘
--add channels 'defaults'Ah, could it be that your ipython configuration in ~/.ipython/ maybe contains the enabling of some additional IPython features which fail because you don't have the necessary packages installed? Would you be willing to try and rm -rf ~/.ipython, to see if the problem persists.
michaelaye
commented
8 years ago Isn't your advice a bit irresponsible? I do some hell of a setup in .ipython (import's and such) and you ask me just to delete it? What if I'd be a beginner not realizing this? I renamed it to `~/.ipython_backup:
(bar)└─❱❱❱ ls -lad .i* +4107 22:56 ❰─┘
drwxr-xr-x 3 klay6683 dusers 102B Apr 6 2015 .Isis
drwxr-xr-x 6 klay6683 dusers 204B Oct 13 2015 .idl
-rw-r--r-- 1 klay6683 dusers 126B Aug 7 2015 .inputrc
drwxr-xr-x 5 klay6683 dusers 170B Oct 17 2015 .ipynb_checkpoints
lrwxr-xr-x 1 klay6683 dusers 39B Feb 15 15:05 .ipython_backup -> /Users/klay6683/Dropbox/Mackup/.ipython
drwxr-xr-x 4 klay6683 dusers 136B Jun 5 16:44 .iterm2
-rwxr-xr-x 1 klay6683 dusers 4.8K Jun 5 16:44 .iterm2_shell_integration.zshand it still doesn't work, with the exact same error signature. Question: Why do things work when I downgrade to IPython 4.1.2 as I reported above?
ilanschnell
commented
8 years ago Sorry for the irresponsible advice. I looked at lib/python3.5/site-packages/IPython/utils/PyColorize.py in my test installation an the failing line 57 is not from .colorable import Colorable but if PY3:. To me that indicates that your IPython 4.2.0 package is coming from a different source. Can you try $ conda install --force ipython?
michaelaye
commented
8 years ago Wow, that's it! So it's this bug I reported in March already again, I guess. :(
https://github.com/conda/conda/issues/2316
Thanks for your help!
michaelaye
commented
8 years ago I just realized that a beginner most likely wouldn't have hell of a setup in .ipython. ;)
ilanschnell
commented
8 years ago A beginner would have the default .ipython without any manual edits, such that blowing it away wouldn't be a loss :-)
On OSX 10.10.5, this happens after upgrade to 4.2. Note that all is fine after I downgrade to 4.1.2: