Open kalefranz opened 6 years ago
From @mingwandroid on February 23, 2018 16:37
conda install rstudio
please.
From @dturaev on February 23, 2018 16:44
Done, but same problem as before.
From @dturaev on February 23, 2018 17:4
The issue is pretty much open for me, and I don't think the problem is that obvious, but well...
@dturaev you didn't provide the info that the template asked you for in this bug report.
We need to see conda info
and conda list --show-channel-urls
.
FWIW, I frequently run Anaconda's R and Anaconda's RStudio together on CentOS 7 (and on various Ubuntu releases and ArchLinux).
Rstudio server runs nicely with yum-installed R
Given this information I suspect you have conflicting locally-built R packages in ~/R/library
. Please move them out of the way and try again.
I switched to Anaconda3, no change. I also shouldn't have any locally-built R packages... Also, problem remained after yum remove R R-devel R-core R-core-devel. Sorry, my bad, here it is:
(base) [root@node apps]# conda info
active environment : base
active env location : /apps/anaconda3
shell level : 1
user config file : /root/.condarc
populated config files : /root/.condarc
conda version : 4.4.10
conda-build version : 3.4.1
python version : 3.6.4.final.0
base environment : /apps/anaconda3 (writable)
channel URLs : https://conda.anaconda.org/r/linux-64
https://conda.anaconda.org/r/noarch
https://repo.continuum.io/pkgs/main/linux-64
https://repo.continuum.io/pkgs/main/noarch
https://repo.continuum.io/pkgs/free/linux-64
https://repo.continuum.io/pkgs/free/noarch
https://repo.continuum.io/pkgs/r/linux-64
https://repo.continuum.io/pkgs/r/noarch
https://repo.continuum.io/pkgs/pro/linux-64
https://repo.continuum.io/pkgs/pro/noarch
https://conda.anaconda.org/bioconda/linux-64
https://conda.anaconda.org/bioconda/noarch
https://conda.anaconda.org/conda-forge/linux-64
https://conda.anaconda.org/conda-forge/noarch
package cache : /apps/anaconda3/pkgs
/root/.conda/pkgs
envs directories : /apps/anaconda3/envs
/root/.conda/envs
platform : linux-64
user-agent : conda/4.4.10 requests/2.18.4 CPython/3.6.4 Linux/3.10.0-693.17.1.el7.x86_64 centos/7 glibc/2.17
UID:GID : 0:0
netrc file : None
offline mode : False
(base) [root@node apps]# conda list --show-channel-urls
# packages in environment at /apps/anaconda3:
#
# Name Version Build Channel
_ipyw_jlab_nb_ext_conf 0.1.0 py36he11e457_0 defaults
_r-mutex 1.0.0 anacondar_1 r
alabaster 0.7.10 py36h306e16b_0 defaults
anaconda 5.1.0 py36_2 defaults
anaconda-client 1.6.9 py36_0 defaults
anaconda-navigator 1.7.0 py36_0 defaults
anaconda-project 0.8.2 py36h44fb852_0 defaults
asn1crypto 0.24.0 py36_0 defaults
astroid 1.6.1 py36_0 defaults
astropy 2.0.3 py36h14c3975_0 defaults
attrs 17.4.0 py36_0 defaults
babel 2.5.3 py36_0 defaults
backports 1.0 py36hfa02d7e_1 defaults
backports.shutil_get_terminal_size 1.0.0 py36hfea85ff_2 defaults
beautifulsoup4 4.6.0 py36h49b8c8c_1 defaults
bitarray 0.8.1 py36h14c3975_1 defaults
bkcharts 0.2 py36h735825a_0 defaults
blaze 0.11.3 py36h4e06776_0 defaults
bleach 2.1.2 py36_0 defaults
bokeh 0.12.13 py36h2f9c1c0_0 defaults
boto 2.48.0 py36h6e4cd66_1 defaults
bottleneck 1.2.1 py36haac1ea0_0 defaults
bzip2 1.0.6 h9a117a8_4 defaults
ca-certificates 2017.08.26 h1d4fec5_0 defaults
cairo 1.14.12 h77bcde2_0 defaults
certifi 2018.1.18 py36_0 defaults
cffi 1.11.4 py36h9745a5d_0 defaults
chardet 3.0.4 py36h0f667ec_1 defaults
click 6.7 py36h5253387_0 defaults
cloudpickle 0.5.2 py36_1 defaults
clyent 1.2.2 py36h7e57e65_1 defaults
colorama 0.3.9 py36h489cec4_0 defaults
conda 4.4.10 py36_0 defaults
conda-build 3.4.1 py36_0 defaults
conda-env 2.6.0 h36134e3_1 defaults
conda-verify 2.0.0 py36h98955d8_0 defaults
contextlib2 0.5.5 py36h6c84a62_0 defaults
cryptography 2.1.4 py36hd09be54_0 defaults
curl 7.58.0 h84994c4_0 defaults
cycler 0.10.0 py36h93f1223_0 defaults
cyrus-sasl 2.1.26 h1dd3434_1 defaults
cython 0.27.3 py36h1860423_0 defaults
cytoolz 0.9.0 py36h14c3975_0 defaults
dask 0.16.1 py36_0 defaults
dask-core 0.16.1 py36_0 defaults
datashape 0.5.4 py36h3ad6b5c_0 defaults
dbus 1.12.2 hc3f9b76_1 defaults
decorator 4.2.1 py36_0 defaults
distributed 1.20.2 py36_0 defaults
docutils 0.14 py36hb0f60f5_0 defaults
entrypoints 0.2.3 py36h1aec115_2 defaults
et_xmlfile 1.0.1 py36hd6bccc3_0 defaults
expat 2.2.5 he0dffb1_0 defaults
fastcache 1.0.2 py36h14c3975_2 defaults
filelock 2.0.13 py36h646ffb5_0 defaults
flask 0.12.2 py36hb24657c_0 defaults
flask-cors 3.0.3 py36h2d857d3_0 defaults
font-ttf-dejavu-sans-mono 2.37 h6964260_0 defaults
font-ttf-inconsolata 2.001 hcb22688_0 defaults
font-ttf-source-code-pro 2.030 h7457263_0 defaults
font-ttf-ubuntu 0.83 h8b1ccd4_0 defaults
fontconfig 2.12.4 h88586e7_1 defaults
fonts-anaconda 1 h8fa9717_0 defaults
freetype 2.8 hab7d2ae_1 defaults
get_terminal_size 1.0.0 haa9412d_0 defaults
gevent 1.2.2 py36h2fe25dc_0 defaults
glib 2.53.6 h5d9569c_2 defaults
glob2 0.6 py36he249c77_0 defaults
gmp 6.1.2 h6c8ec71_1 defaults
gmpy2 2.0.8 py36hc8893dd_2 defaults
graphite2 1.3.10 hf63cedd_1 defaults
greenlet 0.4.12 py36h2d503a6_0 defaults
gsl 2.2.1 h0c605f7_3 defaults
gst-plugins-base 1.12.4 h33fb286_0 defaults
gstreamer 1.12.4 hb53b477_0 defaults
h5py 2.7.1 py36h3585f63_0 defaults
harfbuzz 1.7.4 hc5b324e_0 defaults
hdf5 1.10.1 h9caa474_1 defaults
heapdict 1.0.0 py36_2 defaults
html5lib 1.0.1 py36h2f9c1c0_0 defaults
icu 58.2 h9c2bf20_1 defaults
idna 2.6 py36h82fb2a8_1 defaults
imageio 2.2.0 py36he555465_0 defaults
imagesize 0.7.1 py36h52d8127_0 defaults
intel-openmp 2018.0.0 hc7b2577_8 defaults
ipykernel 4.8.0 py36_0 defaults
ipython 6.2.1 py36h88c514a_1 defaults
ipython_genutils 0.2.0 py36hb52b0d5_0 defaults
ipywidgets 7.1.1 py36_0 defaults
isort 4.2.15 py36had401c0_0 defaults
itsdangerous 0.24 py36h93cc618_1 defaults
jbig 2.1 hdba287a_0 defaults
jdcal 1.3 py36h4c697fb_0 defaults
jedi 0.11.1 py36_0 defaults
jinja2 2.10 py36ha16c418_0 defaults
jpeg 9b h024ee3a_2 defaults
jsonschema 2.6.0 py36h006f8b5_0 defaults
jupyter 1.0.0 py36_4 defaults
jupyter_client 5.2.2 py36_0 defaults
jupyter_console 5.2.0 py36he59e554_1 defaults
jupyter_core 4.4.0 py36h7c827e3_0 defaults
jupyterlab 0.31.5 py36_0 defaults
jupyterlab_launcher 0.10.2 py36_0 defaults
krb5 1.14.2 hcdc1b81_6 defaults
lazy-object-proxy 1.3.1 py36h10fcdad_0 defaults
libcurl 7.58.0 h1ad7b7a_0 defaults
libedit 3.1 heed3624_0 defaults
libffi 3.2.1 hd88cf55_4 defaults
libgcc-ng 7.2.0 h7cc24e2_2 defaults
libgfortran-ng 7.2.0 h9f7466a_2 defaults
libntlm 1.4 h14c3975_2 defaults
libpng 1.6.34 hb9fc6fc_0 defaults
libsodium 1.0.15 hf101ebd_0 defaults
libssh2 1.8.0 h9cfc8f7_4 defaults
libstdcxx-ng 7.2.0 h7a57d05_2 defaults
libtiff 4.0.9 h28f6b97_0 defaults
libtool 2.4.6 h544aabb_3 defaults
libuuid 1.0.3 h1bed415_2 defaults
libxcb 1.12 hcd93eb1_4 defaults
libxml2 2.9.7 h26e45fe_0 defaults
libxslt 1.1.32 h1312cb7_0 defaults
llvmlite 0.21.0 py36ha241eea_0 defaults
locket 0.2.0 py36h787c0ad_1 defaults
lxml 4.1.1 py36hf71bdeb_1 defaults
lzo 2.10 h49e0be7_2 defaults
markupsafe 1.0 py36hd9260cd_1 defaults
matplotlib 2.1.2 py36h0e671d2_0 defaults
mccabe 0.6.1 py36h5ad9710_1 defaults
mistune 0.8.3 py36_0 defaults
mkl 2018.0.1 h19d6760_4 defaults
mkl-service 1.1.2 py36h17a0993_4 defaults
mpc 1.0.3 hec55b23_5 defaults
mpfr 3.1.5 h11a74b3_2 defaults
mpmath 1.0.0 py36hfeacd6b_2 defaults
msgpack-python 0.5.1 py36h6bb024c_0 defaults
multipledispatch 0.4.9 py36h41da3fb_0 defaults
navigator-updater 0.1.0 py36h14770f7_0 defaults
nbconvert 5.3.1 py36hb41ffb7_0 defaults
nbformat 4.4.0 py36h31c9010_0 defaults
ncurses 6.0 h9df7e31_2 defaults
networkx 2.1 py36_0 defaults
nltk 3.2.5 py36h7532b22_0 defaults
nose 1.3.7 py36hcdf7029_2 defaults
notebook 5.4.0 py36_0 defaults
numba 0.36.2 np114py36hc6662d5_0 defaults
numexpr 2.6.4 py36hc4a3f9a_0 defaults
numpy 1.14.0 py36h3dfced4_1 defaults
numpydoc 0.7.0 py36h18f165f_0 defaults
odo 0.5.1 py36h90ed295_0 defaults
olefile 0.45.1 py36_0 defaults
openpyxl 2.4.10 py36_0 defaults
openssl 1.0.2n hb7f436b_0 defaults
packaging 16.8 py36ha668100_1 defaults
pandas 0.22.0 py36hf484d3e_0 defaults
pandoc 1.19.2.1 hea2e7c5_1 defaults
pandocfilters 1.4.2 py36ha6701b7_1 defaults
pango 1.41.0 hd475d92_0 defaults
parso 0.1.1 py36h35f843b_0 defaults
partd 0.3.8 py36h36fd896_0 defaults
patchelf 0.9 hf79760b_2 defaults
path.py 10.5 py36h55ceabb_0 defaults
pathlib2 2.3.0 py36h49efa8e_0 defaults
patsy 0.5.0 py36_0 defaults
pcre 8.41 hc27e229_1 defaults
pep8 1.7.1 py36_0 defaults
pexpect 4.3.1 py36_0 defaults
pickleshare 0.7.4 py36h63277f8_0 defaults
pillow 5.0.0 py36h3deb7b8_0 defaults
pip 9.0.1 py36h6c6f9ce_4 defaults
pixman 0.34.0 hceecf20_3 defaults
pkginfo 1.4.1 py36h215d178_1 defaults
pluggy 0.6.0 py36hb689045_0 defaults
ply 3.10 py36hed35086_0 defaults
prompt_toolkit 1.0.15 py36h17d85b1_0 defaults
psutil 5.4.3 py36h14c3975_0 defaults
ptyprocess 0.5.2 py36h69acd42_0 defaults
py 1.5.2 py36h29bf505_0 defaults
pycodestyle 2.3.1 py36hf609f19_0 defaults
pycosat 0.6.3 py36h0a5515d_0 defaults
pycparser 2.18 py36hf9f622e_1 defaults
pycrypto 2.6.1 py36h14c3975_7 defaults
pycurl 7.43.0.1 py36hb7f436b_0 defaults
pyflakes 1.6.0 py36h7bd6a15_0 defaults
pygments 2.2.0 py36h0d3125c_0 defaults
pylint 1.8.2 py36_0 defaults
pyodbc 4.0.22 py36hf484d3e_0 defaults
pyopenssl 17.5.0 py36h20ba746_0 defaults
pyparsing 2.2.0 py36hee85983_1 defaults
pyqt 5.6.0 py36h0386399_5 defaults
pysocks 1.6.7 py36hd97a5b1_1 defaults
pytables 3.4.2 py36h3b5282a_2 defaults
pytest 3.3.2 py36_0 defaults
python 3.6.4 hc3d631a_1 defaults
python-dateutil 2.6.1 py36h88d3b88_1 defaults
pytz 2017.3 py36h63b9c63_0 defaults
pywavelets 0.5.2 py36he602eb0_0 defaults
pyyaml 3.12 py36hafb9ca4_1 defaults
pyzmq 16.0.3 py36he2533c7_0 defaults
qt 5.6.2 h974d657_12 defaults
qtawesome 0.4.4 py36h609ed8c_0 defaults
qtconsole 4.3.1 py36h8f73b5b_0 defaults
qtpy 1.3.1 py36h3691cc8_0 defaults
r-assertthat 0.2.0 r342h06193eb_0 r
r-backports 1.1.1 r342h9a9f1f2_0 r
r-base 3.4.2 haf99962_0 r
r-base64enc 0.1_3 r342h7c929ec_4 r
r-bh 1.65.0_1 r342h2d7c2ce_0 r
r-bindr 0.1 r342hdee8079_0 r
r-bindrcpp 0.2 r342h4ea5b31_0 r
r-bit 1.1_12 r342h7a05cba_0 r
r-bit64 0.9_7 r342hcc44603_0 r
r-bitops 1.0_6 r342hd891396_4 r
r-blob 1.1.0 r342hf606c5c_0 r
r-boot 1.3_20 r342ha5ac741_0 r
r-broom 0.4.2 r342h90c284a_0 r
r-caret 6.0_77 r342h201f268_0 r
r-catools 1.17.1 r342hf01772b_4 r
r-cellranger 1.1.0 r342h51baf57_0 r
r-class 7.3_14 r342h4797347_4 r
r-cluster 2.0.6 r342hcb72a25_0 r
r-codetools 0.2_15 r342hc9ffb9b_0 r
r-colorspace 1.3_2 r342h81b277d_0 r
r-config 0.2 r342hcf13b6a_0 r
r-crayon 1.3.4 r342h0ed458a_0 r
r-curl 3.0 r342hba591e3_0 r
r-cvst 0.2_1 r342h830f301_0 r
r-data.table 1.10.4_1 r342h3908b10_0 r
r-dbi 0.7 r342h835dbd3_0 r
r-dbplyr 1.1.0 r342h3750f00_0 r
r-ddalpha 1.3.1 r342hd2d3f94_0 r
r-deoptimr 1.0_8 r342h996e1ad_0 r
r-dichromat 2.0_0 r342h341c752_4 r
r-digest 0.6.12 r342hee14287_0 r
r-dimred 0.1.0 r342hb158d3e_0 r
r-dplyr 0.7.4 r342hee63e26_0 r
r-drr 0.0.2 r342h0fe108c_0 r
r-essentials 1.7.0 r342hf65ed6a_0 r
r-evaluate 0.10.1 r342hb679cc2_0 r
r-forcats 0.2.0 r342h5fcb364_0 r
r-foreach 1.4.3 r342h49221b0_4 r
r-foreign 0.8_69 r342hbd6b6bb_0 r
r-formatr 1.5 r342h0e06a18_0 r
r-ggplot2 2.2.1 r342h8b6cf70_0 r
r-gistr 0.4.0 r342h5cd5773_0 r
r-glmnet 2.0_13 r342h0aac7f1_0 r
r-glue 1.1.1 r342h3154e12_0 r
r-gower 0.1.2 r342h54e18f5_0 r
r-gtable 0.2.0 r342h8e3b2c8_0 r
r-haven 1.1.0 r342h8909e7d_0 r
r-hexbin 1.27.1 r342h72fd8d9_4 r
r-highr 0.6 r342h2351100_0 r
r-hms 0.3 r342ha729a9b_0 r
r-htmltools 0.3.6 r342h4080c21_0 r
r-htmlwidgets 0.9 r342h7fcc9b6_0 r
r-httpuv 1.3.5 r342ha5ddd88_0 r
r-httr 1.3.1 r342h7aba7de_0 r
r-ipred 0.9_6 r342h7d58d5b_0 r
r-irdisplay 0.4.4 r342hc31a1b2_0 r
r-irkernel 0.8.9 r342hfe3cb8f_0 r
r-iterators 1.0.8 r342h4caec00_4 r
r-jsonlite 1.5 r342hf92f79e_0 r
r-kernlab 0.9_25 r342hd770e69_0 r
r-kernsmooth 2.23_15 r342hdc3efa4_4 r
r-knitr 1.17 r342h6500ef9_0 r
r-labeling 0.3 r342h7c30189_4 r
r-lattice 0.20_35 r342h0f762c2_0 r
r-lava 1.5.1 r342h598eca9_0 r
r-lazyeval 0.2.0 r342h346dbdc_0 r
r-lubridate 1.6.0 r342h47739ec_0 r
r-magrittr 1.5 r342h895a831_4 r
r-maps 3.2.0 r342h79c810f_0 r
r-markdown 0.8 r342h4cc6e3e_0 r
r-mass 7.3_47 r342hd8605c9_0 r
r-matrix 1.2_11 r342h3a55fe1_0 r
r-mgcv 1.8_22 r342h176cc83_0 r
r-mime 0.5 r342h01856a9_0 r
r-miniui 0.1.1 r342h33c7739_0 r
r-mnormt 1.5_5 r342he1a489d_0 r
r-modelmetrics 1.1.0 r342h5a23eb1_0 r
r-modelr 0.1.1 r342heb933ea_0 r
r-mongolite 1.2 r342hdcf03d2_0 r
r-munsell 0.4.3 r342h79883fb_0 r
r-nlme 3.1_131 r342h7f704e8_0 r
r-nnet 7.3_12 r342ha98c111_0 r
r-numderiv 2016.8_1 r342h12eb246_0 r
r-odbc 1.1.2 r342hf7c7794_0 r
r-openssl 0.9.7 r342h1e3c16d_0 r
r-packrat 0.4.8_1 r342h7bab2f7_0 r
r-pbdzmq 0.2_6 r342h934a24f_0 r
r-pkgconfig 2.0.1 r342h5d9b92e_0 r
r-pki 0.1_5.1 r342hba91d42_0 r
r-plogr 0.1_1 r342h6d7f4c2_0 r
r-plyr 1.8.4 r342h876901b_0 r
r-prodlim 1.6.1 r342hd95c883_0 r
r-profvis 0.3.3 r342h36dbb6c_0 r
r-pryr 0.1.2 r342hf3bf84b_0 r
r-psych 1.7.8 r342h1e2dc86_0 r
r-purrr 0.2.3 r342h7916a1c_0 r
r-quantmod 0.4_11 r342h9c9c021_0 r
r-r6 2.2.2 r342hcc750b5_0 r
r-randomforest 4.6_12 r342h41e62a9_4 r
r-rappdirs 0.3.1 r342h03ed50e_0 r
r-rbokeh 0.5.0 r342h257354a_0 r
r-rcolorbrewer 1.1_2 r342h0dda8fb_0 r
r-rcpp 0.12.13 r342h9f83869_0 r
r-rcpproll 0.2.2 r342hdd0cc16_0 r
r-rcurl 1.95_4.8 r342hecb3894_0 r
r-readr 1.1.1 r342hb25467c_0 r
r-readxl 1.0.0 r342h1e5739b_0 r
r-recipes 0.1.0 r342h0924b81_0 r
r-recommended 3.4.2 h1751db4_0 r
r-rematch 1.0.1 r342he3f91f1_0 r
r-repr 0.12.0 r342hde08b23_0 r
r-reshape2 1.4.2 r342h2e254a0_0 r
r-rjava 0.9_9 r342h9890981_0 r
r-rjdbc 0.2_5 r342he0388cf_0 r
r-rjsonio 1.3_0 r342h5685322_4 r
r-rlang 0.1.2 r342hc878738_0 r
r-rmarkdown 1.6 r342hacd9e3e_2 r
r-robustbase 0.92_7 r342h6021a74_0 r
r-rpart 4.1_11 r342hd35cc14_0 r
r-rprojroot 1.2 r342hd69aa9e_0 r
r-rsconnect 0.8.5 r342h3a8d77b_0 r
r-rstudioapi 0.7 r342hedff9e9_0 r
r-rvest 0.3.2 r342h8e81af5_0 r
r-scales 0.5.0 r342h876bdd3_0 r
r-selectr 0.3_1 r342hd6c1ff9_0 r
r-sfsmisc 1.1_1 r342hadb04b4_0 r
r-shiny 1.0.5 r342hc0a01ce_0 r
r-sourcetools 0.1.6 r342h519fec0_0 r
r-sparklyr 0.6.3 r342hac80a45_0 r
r-spatial 7.3_11 r342hff2a1d0_4 r
r-stringi 1.1.6 r342hf484d3e_0 r
r-stringr 1.2.0 r342h701d218_0 r
r-survival 2.41_3 r342hac888f2_0 r
r-tibble 1.3.4 r342h041fa31_0 r
r-tidyr 0.7.1 r342h1bc61e7_0 r
r-tidyselect 0.2.2 r342h04f720c_0 r
r-tidyverse 1.1.1 r342hf9e2102_0 r
r-timedate 3012.100 r342h48d2e88_4 r
r-ttr 0.23_2 r342hf82c04a_0 r
r-uuid 0.1_2 r342h1393287_4 r
r-viridislite 0.2.0 r342h3706391_0 r
r-withr 2.0.0 r342hfa1897f_0 r
r-xml2 1.1.1 r342h3ff9a91_0 r
r-xtable 1.8_2 r342hb75f6e7_0 r
r-xts 0.10_0 r342h17852d6_4 r
r-yaml 2.1.14 r342h72d8650_0 r
r-zoo 1.8_0 r342h9faeba2_0 r
readline 7.0 ha6073c6_4 defaults
requests 2.18.4 py36he2e5f8d_1 defaults
rope 0.10.7 py36h147e2ec_0 defaults
rstudio 1.1.383 h2c9cdda_2 r
ruamel_yaml 0.15.35 py36h14c3975_1 defaults
scikit-image 0.13.1 py36h14c3975_1 defaults
scikit-learn 0.19.1 py36h7aa7ec6_0 defaults
scipy 1.0.0 py36hbf646e7_0 defaults
seaborn 0.8.1 py36hfad7ec4_0 defaults
send2trash 1.4.2 py36_0 defaults
setuptools 38.4.0 py36_0 defaults
simplegeneric 0.8.1 py36_2 defaults
singledispatch 3.4.0.3 py36h7a266c3_0 defaults
sip 4.18.1 py36h51ed4ed_2 defaults
six 1.11.0 py36h372c433_1 defaults
snowballstemmer 1.2.1 py36h6febd40_0 defaults
sortedcollections 0.5.3 py36h3c761f9_0 defaults
sortedcontainers 1.5.9 py36_0 defaults
sphinx 1.6.6 py36_0 defaults
sphinxcontrib 1.0 py36h6d0f590_1 defaults
sphinxcontrib-websupport 1.0.1 py36hb5cb234_1 defaults
spyder 3.2.6 py36_0 defaults
sqlalchemy 1.2.1 py36h14c3975_0 defaults
sqlite 3.22.0 h1bed415_0 defaults
statsmodels 0.8.0 py36h8533d0b_0 defaults
sympy 1.1.1 py36hc6d1c1c_0 defaults
tblib 1.3.2 py36h34cf8b6_0 defaults
terminado 0.8.1 py36_1 defaults
testpath 0.3.1 py36h8cadb63_0 defaults
tk 8.6.7 hc745277_3 defaults
toolz 0.9.0 py36_0 defaults
tornado 4.5.3 py36_0 defaults
traitlets 4.3.2 py36h674d592_0 defaults
typing 3.6.2 py36h7da032a_0 defaults
unicodecsv 0.14.1 py36ha668878_0 defaults
unixodbc 2.3.4 hc36303a_1 defaults
urllib3 1.22 py36hbe7ace6_0 defaults
wcwidth 0.1.7 py36hdf4376a_0 defaults
webencodings 0.5.1 py36h800622e_1 defaults
werkzeug 0.14.1 py36_0 defaults
wheel 0.30.0 py36hfd4bba0_1 defaults
widgetsnbextension 3.1.0 py36_0 defaults
wrapt 1.10.11 py36h28b7045_0 defaults
xlrd 1.1.0 py36h1db9f0c_1 defaults
xlsxwriter 1.0.2 py36h3de1aca_0 defaults
xlwt 1.3.0 py36h7b00a1f_0 defaults
xz 5.2.3 h55aa19d_2 defaults
yaml 0.1.7 had09818_2 defaults
zeromq 4.2.2 hbedb6e5_2 defaults
zict 0.1.3 py36h3a3bf81_0 defaults
zlib 1.2.11 ha838bed_2 defaults
Thanks for your help.
I switched to Anaconda3, no change. I also shouldn't have any locally-built R packages... Also, problem remained after yum remove R R-devel R-core R-core-devel. Sorry, my bad, here it is:
(base) [root@node apps]# conda info active environment : base active env location : /apps/anaconda3 shell level : 1 user config file : /root/.condarc populated config files : /root/.condarc conda version : 4.4.10 conda-build version : 3.4.1 python version : 3.6.4.final.0 base environment : /apps/anaconda3 (writable) channel URLs : https://conda.anaconda.org/r/linux-64 https://conda.anaconda.org/r/noarch https://repo.continuum.io/pkgs/main/linux-64 https://repo.continuum.io/pkgs/main/noarch https://repo.continuum.io/pkgs/free/linux-64 https://repo.continuum.io/pkgs/free/noarch https://repo.continuum.io/pkgs/r/linux-64 https://repo.continuum.io/pkgs/r/noarch https://repo.continuum.io/pkgs/pro/linux-64 https://repo.continuum.io/pkgs/pro/noarch https://conda.anaconda.org/bioconda/linux-64 https://conda.anaconda.org/bioconda/noarch https://conda.anaconda.org/conda-forge/linux-64 https://conda.anaconda.org/conda-forge/noarch package cache : /apps/anaconda3/pkgs /root/.conda/pkgs envs directories : /apps/anaconda3/envs /root/.conda/envs platform : linux-64 user-agent : conda/4.4.10 requests/2.18.4 CPython/3.6.4 Linux/3.10.0-693.17.1.el7.x86_64 centos/7 glibc/2.17 UID:GID : 0:0 netrc file : None offline mode : False (base) [root@node apps]# conda list --show-channel-urls # packages in environment at /apps/anaconda3: # # Name Version Build Channel _ipyw_jlab_nb_ext_conf 0.1.0 py36he11e457_0 defaults _r-mutex 1.0.0 anacondar_1 r alabaster 0.7.10 py36h306e16b_0 defaults anaconda 5.1.0 py36_2 defaults anaconda-client 1.6.9 py36_0 defaults anaconda-navigator 1.7.0 py36_0 defaults anaconda-project 0.8.2 py36h44fb852_0 defaults asn1crypto 0.24.0 py36_0 defaults astroid 1.6.1 py36_0 defaults astropy 2.0.3 py36h14c3975_0 defaults attrs 17.4.0 py36_0 defaults babel 2.5.3 py36_0 defaults backports 1.0 py36hfa02d7e_1 defaults backports.shutil_get_terminal_size 1.0.0 py36hfea85ff_2 defaults beautifulsoup4 4.6.0 py36h49b8c8c_1 defaults bitarray 0.8.1 py36h14c3975_1 defaults bkcharts 0.2 py36h735825a_0 defaults blaze 0.11.3 py36h4e06776_0 defaults bleach 2.1.2 py36_0 defaults bokeh 0.12.13 py36h2f9c1c0_0 defaults boto 2.48.0 py36h6e4cd66_1 defaults bottleneck 1.2.1 py36haac1ea0_0 defaults bzip2 1.0.6 h9a117a8_4 defaults ca-certificates 2017.08.26 h1d4fec5_0 defaults cairo 1.14.12 h77bcde2_0 defaults certifi 2018.1.18 py36_0 defaults cffi 1.11.4 py36h9745a5d_0 defaults chardet 3.0.4 py36h0f667ec_1 defaults click 6.7 py36h5253387_0 defaults cloudpickle 0.5.2 py36_1 defaults clyent 1.2.2 py36h7e57e65_1 defaults colorama 0.3.9 py36h489cec4_0 defaults conda 4.4.10 py36_0 defaults conda-build 3.4.1 py36_0 defaults conda-env 2.6.0 h36134e3_1 defaults conda-verify 2.0.0 py36h98955d8_0 defaults contextlib2 0.5.5 py36h6c84a62_0 defaults cryptography 2.1.4 py36hd09be54_0 defaults curl 7.58.0 h84994c4_0 defaults cycler 0.10.0 py36h93f1223_0 defaults cyrus-sasl 2.1.26 h1dd3434_1 defaults cython 0.27.3 py36h1860423_0 defaults cytoolz 0.9.0 py36h14c3975_0 defaults dask 0.16.1 py36_0 defaults dask-core 0.16.1 py36_0 defaults datashape 0.5.4 py36h3ad6b5c_0 defaults dbus 1.12.2 hc3f9b76_1 defaults decorator 4.2.1 py36_0 defaults distributed 1.20.2 py36_0 defaults docutils 0.14 py36hb0f60f5_0 defaults entrypoints 0.2.3 py36h1aec115_2 defaults et_xmlfile 1.0.1 py36hd6bccc3_0 defaults expat 2.2.5 he0dffb1_0 defaults fastcache 1.0.2 py36h14c3975_2 defaults filelock 2.0.13 py36h646ffb5_0 defaults flask 0.12.2 py36hb24657c_0 defaults flask-cors 3.0.3 py36h2d857d3_0 defaults font-ttf-dejavu-sans-mono 2.37 h6964260_0 defaults font-ttf-inconsolata 2.001 hcb22688_0 defaults font-ttf-source-code-pro 2.030 h7457263_0 defaults font-ttf-ubuntu 0.83 h8b1ccd4_0 defaults fontconfig 2.12.4 h88586e7_1 defaults fonts-anaconda 1 h8fa9717_0 defaults freetype 2.8 hab7d2ae_1 defaults get_terminal_size 1.0.0 haa9412d_0 defaults gevent 1.2.2 py36h2fe25dc_0 defaults glib 2.53.6 h5d9569c_2 defaults glob2 0.6 py36he249c77_0 defaults gmp 6.1.2 h6c8ec71_1 defaults gmpy2 2.0.8 py36hc8893dd_2 defaults graphite2 1.3.10 hf63cedd_1 defaults greenlet 0.4.12 py36h2d503a6_0 defaults gsl 2.2.1 h0c605f7_3 defaults gst-plugins-base 1.12.4 h33fb286_0 defaults gstreamer 1.12.4 hb53b477_0 defaults h5py 2.7.1 py36h3585f63_0 defaults harfbuzz 1.7.4 hc5b324e_0 defaults hdf5 1.10.1 h9caa474_1 defaults heapdict 1.0.0 py36_2 defaults html5lib 1.0.1 py36h2f9c1c0_0 defaults icu 58.2 h9c2bf20_1 defaults idna 2.6 py36h82fb2a8_1 defaults imageio 2.2.0 py36he555465_0 defaults imagesize 0.7.1 py36h52d8127_0 defaults intel-openmp 2018.0.0 hc7b2577_8 defaults ipykernel 4.8.0 py36_0 defaults ipython 6.2.1 py36h88c514a_1 defaults ipython_genutils 0.2.0 py36hb52b0d5_0 defaults ipywidgets 7.1.1 py36_0 defaults isort 4.2.15 py36had401c0_0 defaults itsdangerous 0.24 py36h93cc618_1 defaults jbig 2.1 hdba287a_0 defaults jdcal 1.3 py36h4c697fb_0 defaults jedi 0.11.1 py36_0 defaults jinja2 2.10 py36ha16c418_0 defaults jpeg 9b h024ee3a_2 defaults jsonschema 2.6.0 py36h006f8b5_0 defaults jupyter 1.0.0 py36_4 defaults jupyter_client 5.2.2 py36_0 defaults jupyter_console 5.2.0 py36he59e554_1 defaults jupyter_core 4.4.0 py36h7c827e3_0 defaults jupyterlab 0.31.5 py36_0 defaults jupyterlab_launcher 0.10.2 py36_0 defaults krb5 1.14.2 hcdc1b81_6 defaults lazy-object-proxy 1.3.1 py36h10fcdad_0 defaults libcurl 7.58.0 h1ad7b7a_0 defaults libedit 3.1 heed3624_0 defaults libffi 3.2.1 hd88cf55_4 defaults libgcc-ng 7.2.0 h7cc24e2_2 defaults libgfortran-ng 7.2.0 h9f7466a_2 defaults libntlm 1.4 h14c3975_2 defaults libpng 1.6.34 hb9fc6fc_0 defaults libsodium 1.0.15 hf101ebd_0 defaults libssh2 1.8.0 h9cfc8f7_4 defaults libstdcxx-ng 7.2.0 h7a57d05_2 defaults libtiff 4.0.9 h28f6b97_0 defaults libtool 2.4.6 h544aabb_3 defaults libuuid 1.0.3 h1bed415_2 defaults libxcb 1.12 hcd93eb1_4 defaults libxml2 2.9.7 h26e45fe_0 defaults libxslt 1.1.32 h1312cb7_0 defaults llvmlite 0.21.0 py36ha241eea_0 defaults locket 0.2.0 py36h787c0ad_1 defaults lxml 4.1.1 py36hf71bdeb_1 defaults lzo 2.10 h49e0be7_2 defaults markupsafe 1.0 py36hd9260cd_1 defaults matplotlib 2.1.2 py36h0e671d2_0 defaults mccabe 0.6.1 py36h5ad9710_1 defaults mistune 0.8.3 py36_0 defaults mkl 2018.0.1 h19d6760_4 defaults mkl-service 1.1.2 py36h17a0993_4 defaults mpc 1.0.3 hec55b23_5 defaults mpfr 3.1.5 h11a74b3_2 defaults mpmath 1.0.0 py36hfeacd6b_2 defaults msgpack-python 0.5.1 py36h6bb024c_0 defaults multipledispatch 0.4.9 py36h41da3fb_0 defaults navigator-updater 0.1.0 py36h14770f7_0 defaults nbconvert 5.3.1 py36hb41ffb7_0 defaults nbformat 4.4.0 py36h31c9010_0 defaults ncurses 6.0 h9df7e31_2 defaults networkx 2.1 py36_0 defaults nltk 3.2.5 py36h7532b22_0 defaults nose 1.3.7 py36hcdf7029_2 defaults notebook 5.4.0 py36_0 defaults numba 0.36.2 np114py36hc6662d5_0 defaults numexpr 2.6.4 py36hc4a3f9a_0 defaults numpy 1.14.0 py36h3dfced4_1 defaults numpydoc 0.7.0 py36h18f165f_0 defaults odo 0.5.1 py36h90ed295_0 defaults olefile 0.45.1 py36_0 defaults openpyxl 2.4.10 py36_0 defaults openssl 1.0.2n hb7f436b_0 defaults packaging 16.8 py36ha668100_1 defaults pandas 0.22.0 py36hf484d3e_0 defaults pandoc 1.19.2.1 hea2e7c5_1 defaults pandocfilters 1.4.2 py36ha6701b7_1 defaults pango 1.41.0 hd475d92_0 defaults parso 0.1.1 py36h35f843b_0 defaults partd 0.3.8 py36h36fd896_0 defaults patchelf 0.9 hf79760b_2 defaults path.py 10.5 py36h55ceabb_0 defaults pathlib2 2.3.0 py36h49efa8e_0 defaults patsy 0.5.0 py36_0 defaults pcre 8.41 hc27e229_1 defaults pep8 1.7.1 py36_0 defaults pexpect 4.3.1 py36_0 defaults pickleshare 0.7.4 py36h63277f8_0 defaults pillow 5.0.0 py36h3deb7b8_0 defaults pip 9.0.1 py36h6c6f9ce_4 defaults pixman 0.34.0 hceecf20_3 defaults pkginfo 1.4.1 py36h215d178_1 defaults pluggy 0.6.0 py36hb689045_0 defaults ply 3.10 py36hed35086_0 defaults prompt_toolkit 1.0.15 py36h17d85b1_0 defaults psutil 5.4.3 py36h14c3975_0 defaults ptyprocess 0.5.2 py36h69acd42_0 defaults py 1.5.2 py36h29bf505_0 defaults pycodestyle 2.3.1 py36hf609f19_0 defaults pycosat 0.6.3 py36h0a5515d_0 defaults pycparser 2.18 py36hf9f622e_1 defaults pycrypto 2.6.1 py36h14c3975_7 defaults pycurl 7.43.0.1 py36hb7f436b_0 defaults pyflakes 1.6.0 py36h7bd6a15_0 defaults pygments 2.2.0 py36h0d3125c_0 defaults pylint 1.8.2 py36_0 defaults pyodbc 4.0.22 py36hf484d3e_0 defaults pyopenssl 17.5.0 py36h20ba746_0 defaults pyparsing 2.2.0 py36hee85983_1 defaults pyqt 5.6.0 py36h0386399_5 defaults pysocks 1.6.7 py36hd97a5b1_1 defaults pytables 3.4.2 py36h3b5282a_2 defaults pytest 3.3.2 py36_0 defaults python 3.6.4 hc3d631a_1 defaults python-dateutil 2.6.1 py36h88d3b88_1 defaults pytz 2017.3 py36h63b9c63_0 defaults pywavelets 0.5.2 py36he602eb0_0 defaults pyyaml 3.12 py36hafb9ca4_1 defaults pyzmq 16.0.3 py36he2533c7_0 defaults qt 5.6.2 h974d657_12 defaults qtawesome 0.4.4 py36h609ed8c_0 defaults qtconsole 4.3.1 py36h8f73b5b_0 defaults qtpy 1.3.1 py36h3691cc8_0 defaults r-assertthat 0.2.0 r342h06193eb_0 r r-backports 1.1.1 r342h9a9f1f2_0 r r-base 3.4.2 haf99962_0 r r-base64enc 0.1_3 r342h7c929ec_4 r r-bh 1.65.0_1 r342h2d7c2ce_0 r r-bindr 0.1 r342hdee8079_0 r r-bindrcpp 0.2 r342h4ea5b31_0 r r-bit 1.1_12 r342h7a05cba_0 r r-bit64 0.9_7 r342hcc44603_0 r r-bitops 1.0_6 r342hd891396_4 r r-blob 1.1.0 r342hf606c5c_0 r r-boot 1.3_20 r342ha5ac741_0 r r-broom 0.4.2 r342h90c284a_0 r r-caret 6.0_77 r342h201f268_0 r r-catools 1.17.1 r342hf01772b_4 r r-cellranger 1.1.0 r342h51baf57_0 r r-class 7.3_14 r342h4797347_4 r r-cluster 2.0.6 r342hcb72a25_0 r r-codetools 0.2_15 r342hc9ffb9b_0 r r-colorspace 1.3_2 r342h81b277d_0 r r-config 0.2 r342hcf13b6a_0 r r-crayon 1.3.4 r342h0ed458a_0 r r-curl 3.0 r342hba591e3_0 r r-cvst 0.2_1 r342h830f301_0 r r-data.table 1.10.4_1 r342h3908b10_0 r r-dbi 0.7 r342h835dbd3_0 r r-dbplyr 1.1.0 r342h3750f00_0 r r-ddalpha 1.3.1 r342hd2d3f94_0 r r-deoptimr 1.0_8 r342h996e1ad_0 r r-dichromat 2.0_0 r342h341c752_4 r r-digest 0.6.12 r342hee14287_0 r r-dimred 0.1.0 r342hb158d3e_0 r r-dplyr 0.7.4 r342hee63e26_0 r r-drr 0.0.2 r342h0fe108c_0 r r-essentials 1.7.0 r342hf65ed6a_0 r r-evaluate 0.10.1 r342hb679cc2_0 r r-forcats 0.2.0 r342h5fcb364_0 r r-foreach 1.4.3 r342h49221b0_4 r r-foreign 0.8_69 r342hbd6b6bb_0 r r-formatr 1.5 r342h0e06a18_0 r r-ggplot2 2.2.1 r342h8b6cf70_0 r r-gistr 0.4.0 r342h5cd5773_0 r r-glmnet 2.0_13 r342h0aac7f1_0 r r-glue 1.1.1 r342h3154e12_0 r r-gower 0.1.2 r342h54e18f5_0 r r-gtable 0.2.0 r342h8e3b2c8_0 r r-haven 1.1.0 r342h8909e7d_0 r r-hexbin 1.27.1 r342h72fd8d9_4 r r-highr 0.6 r342h2351100_0 r r-hms 0.3 r342ha729a9b_0 r r-htmltools 0.3.6 r342h4080c21_0 r r-htmlwidgets 0.9 r342h7fcc9b6_0 r r-httpuv 1.3.5 r342ha5ddd88_0 r r-httr 1.3.1 r342h7aba7de_0 r r-ipred 0.9_6 r342h7d58d5b_0 r r-irdisplay 0.4.4 r342hc31a1b2_0 r r-irkernel 0.8.9 r342hfe3cb8f_0 r r-iterators 1.0.8 r342h4caec00_4 r r-jsonlite 1.5 r342hf92f79e_0 r r-kernlab 0.9_25 r342hd770e69_0 r r-kernsmooth 2.23_15 r342hdc3efa4_4 r r-knitr 1.17 r342h6500ef9_0 r r-labeling 0.3 r342h7c30189_4 r r-lattice 0.20_35 r342h0f762c2_0 r r-lava 1.5.1 r342h598eca9_0 r r-lazyeval 0.2.0 r342h346dbdc_0 r r-lubridate 1.6.0 r342h47739ec_0 r r-magrittr 1.5 r342h895a831_4 r r-maps 3.2.0 r342h79c810f_0 r r-markdown 0.8 r342h4cc6e3e_0 r r-mass 7.3_47 r342hd8605c9_0 r r-matrix 1.2_11 r342h3a55fe1_0 r r-mgcv 1.8_22 r342h176cc83_0 r r-mime 0.5 r342h01856a9_0 r r-miniui 0.1.1 r342h33c7739_0 r r-mnormt 1.5_5 r342he1a489d_0 r r-modelmetrics 1.1.0 r342h5a23eb1_0 r r-modelr 0.1.1 r342heb933ea_0 r r-mongolite 1.2 r342hdcf03d2_0 r r-munsell 0.4.3 r342h79883fb_0 r r-nlme 3.1_131 r342h7f704e8_0 r r-nnet 7.3_12 r342ha98c111_0 r r-numderiv 2016.8_1 r342h12eb246_0 r r-odbc 1.1.2 r342hf7c7794_0 r r-openssl 0.9.7 r342h1e3c16d_0 r r-packrat 0.4.8_1 r342h7bab2f7_0 r r-pbdzmq 0.2_6 r342h934a24f_0 r r-pkgconfig 2.0.1 r342h5d9b92e_0 r r-pki 0.1_5.1 r342hba91d42_0 r r-plogr 0.1_1 r342h6d7f4c2_0 r r-plyr 1.8.4 r342h876901b_0 r r-prodlim 1.6.1 r342hd95c883_0 r r-profvis 0.3.3 r342h36dbb6c_0 r r-pryr 0.1.2 r342hf3bf84b_0 r r-psych 1.7.8 r342h1e2dc86_0 r r-purrr 0.2.3 r342h7916a1c_0 r r-quantmod 0.4_11 r342h9c9c021_0 r r-r6 2.2.2 r342hcc750b5_0 r r-randomforest 4.6_12 r342h41e62a9_4 r r-rappdirs 0.3.1 r342h03ed50e_0 r r-rbokeh 0.5.0 r342h257354a_0 r r-rcolorbrewer 1.1_2 r342h0dda8fb_0 r r-rcpp 0.12.13 r342h9f83869_0 r r-rcpproll 0.2.2 r342hdd0cc16_0 r r-rcurl 1.95_4.8 r342hecb3894_0 r r-readr 1.1.1 r342hb25467c_0 r r-readxl 1.0.0 r342h1e5739b_0 r r-recipes 0.1.0 r342h0924b81_0 r r-recommended 3.4.2 h1751db4_0 r r-rematch 1.0.1 r342he3f91f1_0 r r-repr 0.12.0 r342hde08b23_0 r r-reshape2 1.4.2 r342h2e254a0_0 r r-rjava 0.9_9 r342h9890981_0 r r-rjdbc 0.2_5 r342he0388cf_0 r r-rjsonio 1.3_0 r342h5685322_4 r r-rlang 0.1.2 r342hc878738_0 r r-rmarkdown 1.6 r342hacd9e3e_2 r r-robustbase 0.92_7 r342h6021a74_0 r r-rpart 4.1_11 r342hd35cc14_0 r r-rprojroot 1.2 r342hd69aa9e_0 r r-rsconnect 0.8.5 r342h3a8d77b_0 r r-rstudioapi 0.7 r342hedff9e9_0 r r-rvest 0.3.2 r342h8e81af5_0 r r-scales 0.5.0 r342h876bdd3_0 r r-selectr 0.3_1 r342hd6c1ff9_0 r r-sfsmisc 1.1_1 r342hadb04b4_0 r r-shiny 1.0.5 r342hc0a01ce_0 r r-sourcetools 0.1.6 r342h519fec0_0 r r-sparklyr 0.6.3 r342hac80a45_0 r r-spatial 7.3_11 r342hff2a1d0_4 r r-stringi 1.1.6 r342hf484d3e_0 r r-stringr 1.2.0 r342h701d218_0 r r-survival 2.41_3 r342hac888f2_0 r r-tibble 1.3.4 r342h041fa31_0 r r-tidyr 0.7.1 r342h1bc61e7_0 r r-tidyselect 0.2.2 r342h04f720c_0 r r-tidyverse 1.1.1 r342hf9e2102_0 r r-timedate 3012.100 r342h48d2e88_4 r r-ttr 0.23_2 r342hf82c04a_0 r r-uuid 0.1_2 r342h1393287_4 r r-viridislite 0.2.0 r342h3706391_0 r r-withr 2.0.0 r342hfa1897f_0 r r-xml2 1.1.1 r342h3ff9a91_0 r r-xtable 1.8_2 r342hb75f6e7_0 r r-xts 0.10_0 r342h17852d6_4 r r-yaml 2.1.14 r342h72d8650_0 r r-zoo 1.8_0 r342h9faeba2_0 r readline 7.0 ha6073c6_4 defaults requests 2.18.4 py36he2e5f8d_1 defaults rope 0.10.7 py36h147e2ec_0 defaults rstudio 1.1.383 h2c9cdda_2 r ruamel_yaml 0.15.35 py36h14c3975_1 defaults scikit-image 0.13.1 py36h14c3975_1 defaults scikit-learn 0.19.1 py36h7aa7ec6_0 defaults scipy 1.0.0 py36hbf646e7_0 defaults seaborn 0.8.1 py36hfad7ec4_0 defaults send2trash 1.4.2 py36_0 defaults setuptools 38.4.0 py36_0 defaults simplegeneric 0.8.1 py36_2 defaults singledispatch 3.4.0.3 py36h7a266c3_0 defaults sip 4.18.1 py36h51ed4ed_2 defaults six 1.11.0 py36h372c433_1 defaults snowballstemmer 1.2.1 py36h6febd40_0 defaults sortedcollections 0.5.3 py36h3c761f9_0 defaults sortedcontainers 1.5.9 py36_0 defaults sphinx 1.6.6 py36_0 defaults sphinxcontrib 1.0 py36h6d0f590_1 defaults sphinxcontrib-websupport 1.0.1 py36hb5cb234_1 defaults spyder 3.2.6 py36_0 defaults sqlalchemy 1.2.1 py36h14c3975_0 defaults sqlite 3.22.0 h1bed415_0 defaults statsmodels 0.8.0 py36h8533d0b_0 defaults sympy 1.1.1 py36hc6d1c1c_0 defaults tblib 1.3.2 py36h34cf8b6_0 defaults terminado 0.8.1 py36_1 defaults testpath 0.3.1 py36h8cadb63_0 defaults tk 8.6.7 hc745277_3 defaults toolz 0.9.0 py36_0 defaults tornado 4.5.3 py36_0 defaults traitlets 4.3.2 py36h674d592_0 defaults typing 3.6.2 py36h7da032a_0 defaults unicodecsv 0.14.1 py36ha668878_0 defaults unixodbc 2.3.4 hc36303a_1 defaults urllib3 1.22 py36hbe7ace6_0 defaults wcwidth 0.1.7 py36hdf4376a_0 defaults webencodings 0.5.1 py36h800622e_1 defaults werkzeug 0.14.1 py36_0 defaults wheel 0.30.0 py36hfd4bba0_1 defaults widgetsnbextension 3.1.0 py36_0 defaults wrapt 1.10.11 py36h28b7045_0 defaults xlrd 1.1.0 py36h1db9f0c_1 defaults xlsxwriter 1.0.2 py36h3de1aca_0 defaults xlwt 1.3.0 py36h7b00a1f_0 defaults xz 5.2.3 h55aa19d_2 defaults yaml 0.1.7 had09818_2 defaults zeromq 4.2.2 hbedb6e5_2 defaults zict 0.1.3 py36h3a3bf81_0 defaults zlib 1.2.11 ha838bed_2 defaults
Thanks for your help.
Was this issue resolved? Facing the exact same issue from RHEL.
Hello, I'm facing the same problem. Did anyone solved the problem ?
Conda info :
active environment : base
active env location : /appli/DTEC/bin/conda
shell level : 1
user config file : /home/miniconda/.condarc
populated config files :
conda version : 4.8.5
conda-build version : not installed
python version : 3.8.5.final.0
virtual packages : __glibc=2.17
base environment : /appli/DTEC/bin/conda (writable)
channel URLs : https://repo.anaconda.com/pkgs/main/linux-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/r/linux-64
https://repo.anaconda.com/pkgs/r/noarch
package cache : /appli/DTEC/bin/conda/pkgs
/home/miniconda/.conda/pkgs
envs directories : /appli/DTEC/bin/conda/envs
/home/miniconda/.conda/envs
platform : linux-64
user-agent : conda/4.8.5 requests/2.24.0 CPython/3.8.5 Linux/3.10.0-1127.el7.x86_64 rhel/7.8 glibc/2.17
UID:GID : 0:0
netrc file : None
offline mode : False
conda info (channel internal but it's mirror channel )
# Name Version Build
_libgcc_mutex 0.1 conda_forge
_openmp_mutex 4.5 1_gnu
_r-mutex 1.0.1 anacondar_1
binutils_impl_linux-64 2.35 h18a2f87_9
binutils_linux-64 2.35 hc3fd857_29
brotlipy 0.7.0 py38h1e0a361_1000
bwidget 1.9.14 0
bzip2 1.0.8 h516909a_3
c-ares 1.16.1 h516909a_3
ca-certificates 2020.6.20 hecda079_0
cairo 1.16.0 h3fc0475_1005
certifi 2020.6.20 py38h32f6830_0
cffi 1.14.3 py38h5bae8af_0
chardet 3.0.4 py38h32f6830_1007
conda 4.8.5 py38h32f6830_1
conda-package-handling 1.7.0 py38h1e0a361_5
cryptography 3.1.1 py38h766eaa4_0
curl 7.71.1 he644dc0_8
expat 2.2.9 he1b5a44_2
fontconfig 2.13.1 h1056068_1002
freetype 2.10.2 he06d7ca_0
fribidi 1.0.10 h516909a_0
gcc_impl_linux-64 7.5.0 hda68d29_13
gcc_linux-64 7.5.0 he2a3fca_29
gettext 0.19.8.1 hc5be6a0_1002
gfortran_impl_linux-64 7.5.0 hfca37b7_17
gfortran_linux-64 7.5.0 ha081f1e_29
glib 2.66.1 h680cd38_0
gmp 6.2.0 he1b5a44_2
graphite2 1.3.13 he1b5a44_1001
gsl 2.6 h294904e_0
gxx_impl_linux-64 7.5.0 h64c220c_13
gxx_linux-64 7.5.0 h547f3ba_29
harfbuzz 2.7.2 hee91db6_0
icu 67.1 he1b5a44_0
idna 2.10 pyh9f0ad1d_0
jpeg 9d h516909a_0
kernel-headers_linux-64 2.6.32 h77966d4_13
krb5 1.17.1 hfafb76e_3
ld_impl_linux-64 2.35 h769bd43_9
libblas 3.8.0 17_openblas
libcblas 3.8.0 17_openblas
libcurl 7.71.1 hcdd3856_8
libedit 3.1.20191231 he28a2e2_2
libev 4.33 h516909a_1
libffi 3.2.1 he1b5a44_1007
libgcc-ng 9.3.0 h5dbcf3e_17
libgfortran-ng 7.5.0 hae1eefd_17
libgfortran4 7.5.0 hae1eefd_17
libglu 9.0.0 he1b5a44_1001
libgomp 9.3.0 h5dbcf3e_17
libiconv 1.16 h516909a_0
liblapack 3.8.0 17_openblas
libnghttp2 1.41.0 h8cfc5f6_2
libopenblas 0.3.10 pthreads_hb3c22a3
libpng 1.6.37 hed695b0_2
libsodium 1.0.18 h516909a_1
libssh2 1.9.0 hab1572f_5
libstdcxx-ng 9.3.0 h2ae2ef3_17
libtiff 4.1.0 hc7e4089_6
libuuid 2.32.1 h14c3975_1000
libwebp-base 1.1.0 h516909a_3
libxcb 1.13 h14c3975_1002
libxml2 2.9.10 h68273f3_2
lz4-c 1.9.2 he1b5a44_3
make 4.3 h516909a_0
ncurses 6.2 he1b5a44_1
openjdk 8.0.265 h516909a_0
openssl 1.1.1h h516909a_0
pandoc 2.10.1 h516909a_0
pango 1.42.4 h7062337_4
pcre 8.44 he1b5a44_0
pip 20.2.3 py_0
pixman 0.38.0 h516909a_1003
pthread-stubs 0.4 h14c3975_1001
pycosat 0.6.3 py38h1e0a361_1004
pycparser 2.20 pyh9f0ad1d_2
pyopenssl 19.1.0 py_1
pysocks 1.7.1 py38h32f6830_1
python 3.8.5 h1103e12_9_cpytho
python_abi 3.8 1_cp38
r-abind 1.4_5 r36h6115d3f_1003
r-acepack 1.4.1 r36h9bbef5b_1005
r-ada 2.0_5 r36_1002
r-ade4 1.7_15 r36h7fa42b6_2
r-anytime 0.3.9 r36h0357c0b_0
r-arules 1.6_6 r36hcdcec82_0
r-askpass 1.1 r36hcdcec82_2
r-assertthat 0.2.1 r36h6115d3f_2
r-attempt 0.3.1 r36h6115d3f_1
r-backports 1.1.10 r36hcdcec82_0
r-base 3.6.3 he766273_3
r-base64enc 0.1_3 r36hcdcec82_1004
r-bbmisc 1.11 r36hcdcec82_1003
r-bh 1.72.0_3 r36h6115d3f_1
r-bigalgebra 0.8.4.1 r36h80f5a37_0
r-biganalytics 1.1.21 r36he1b5a44_0
r-biglm 0.9_2 r36h9bbef5b_0
r-bigmemory 4.5.36 r36h0357c0b_1
r-bigmemory.sri 0.1.3 r36h6115d3f_1004
r-biocmanager 1.30.10 r36h6115d3f_1
r-bipartite 2.15 r36h0357c0b_1
r-bit 4.0.4 r36hcdcec82_0
r-bit64 4.0.5 r36hcdcec82_0
r-bitops 1.0_6 r36hcdcec82_1004
r-blob 1.2.1 r36h6115d3f_1
r-bookdown 0.20 r36h6115d3f_0
r-boot 1.3_25 r36h6115d3f_1
r-brew 1.0_6 r36h6115d3f_1003
r-broom 0.7.1 r36h142f84f_0
r-callr 3.4.4 r36h6115d3f_0
r-car 3.0_10 r36h6115d3f_0
r-cardata 3.0_4 r36h6115d3f_0
r-caret 6.0_86 r36hcdcec82_2
r-catools 1.18.0 r36h0357c0b_1
r-cellranger 1.1.0 r36h6115d3f_1003
r-checkmate 2.0.0 r36hcdcec82_1
r-chron 2.3_56 r36hcdcec82_0
r-class 7.3_17 r36hcdcec82_1
r-classint 0.4_3 r36h9bbef5b_1
r-cli 2.0.2 r36h6115d3f_1
r-clipr 0.7.0 r36h6115d3f_1
r-cluster 2.1.0 r36h9bbef5b_3
r-coda 0.19_4 r36h142f84f_0
r-codetools 0.2_16 r36h6115d3f_1002
r-coin 1.3_1 r36hcdcec82_1
r-colorspace 1.4_1 r36hcdcec82_2
r-commonmark 1.7 r36hcdcec82_1002
r-config 0.3 r36h6115d3f_1003
r-conquer 1.0.2 r36h0357c0b_0
r-corrplot 0.84 r36_1003
r-covr 3.5.1 r36h0357c0b_0
r-cowplot 1.1.0 r36h6115d3f_0
r-cpp11 0.2.2 r36h142f84f_0
r-cramer 0.9_3 r36h6115d3f_2
r-crayon 1.3.4 r36h6115d3f_1003
r-crosstalk 1.1.0.1 r36h6115d3f_1
r-curl 4.3 r36hcdcec82_1
r-data.table 1.12.8 r36hcdcec82_1
r-dbi 1.1.0 r36h6115d3f_1
r-dbplot 0.3.3 r36h6115d3f_1
r-dbplyr 1.4.4 r36h6115d3f_0
r-dbscan 1.1_5 r36h0357c0b_1
r-dendextend 1.14.0 r36h6115d3f_0
r-desc 1.2.0 r36h6115d3f_1003
r-devtools 2.3.2 r36h6115d3f_0
r-digest 0.6.25 r36h0357c0b_2
r-distr 2.8.0 r36hcdcec82_2
r-distributional 0.2.0 r36h6115d3f_0
r-dockerfiler 0.1.3 r36h6115d3f_1
r-doparallel 1.0.15 r36h6115d3f_1
r-dosnow 1.0.18 r36_1
r-dotcall64 1.0_0 r36h9bbef5b_1005
r-dplyr 1.0.2 r36h0357c0b_0
r-dt 0.15 r36h6115d3f_0
r-e1071 1.7_3 r36h0357c0b_1
r-earth 5.2.0 r36h9bbef5b_0
r-ellipse 0.4.2 r36h6115d3f_0
r-ellipsis 0.3.1 r36hcdcec82_0
r-emmeans 1.5.1 r36h6115d3f_0
r-esquisse 0.3.1 r36h6115d3f_0
r-estimability 1.3 r36h6115d3f_1003
r-evaluate 0.14 r36h6115d3f_2
r-expint 0.1_5 r36h96ca727_0
r-extrafont 0.17 r36_1002
r-extrafontdb 1.0 r36h6115d3f_1003
r-fable 0.2.1 r36h0357c0b_0
r-fabletools 0.2.1 r36h6115d3f_0
r-factoextra 1.0.7 r36_1
r-factominer 2.3 r36h6115d3f_1
r-fansi 0.4.1 r36hcdcec82_1
r-farver 2.0.3 r36h0357c0b_1
r-fastmap 1.0.1 r36h0357c0b_1
r-fastmatch 1.1_0 r36hcdcec82_1005
r-ff 4.0.2 r36he1b5a44_0
r-ffbase 0.13.1 r36hcdcec82_0
r-fields 11.5 r36h31ca83e_0
r-fitdistrplus 1.1_1 r36h6115d3f_0
r-flashclust 1.01_2 r36h9bbef5b_1005
r-fnn 1.1.3 r36h0357c0b_2
r-forcats 0.5.0 r36h6115d3f_1
r-foreach 1.5.0 r36h6115d3f_1
r-foreign 0.8_76 r36hcdcec82_1
r-forge 0.2.0 r36h6115d3f_3
r-formula 1.2_3 r36h6115d3f_1003
r-fracdiff 1.5_1 r36hc57f18f_1
r-fs 1.5.0 r36h0357c0b_0
r-future 1.19.1 r36h6115d3f_0
r-future.apply 1.6.0 r36h6115d3f_0
r-gbm 2.1.8 r36h0357c0b_0
r-gdata 2.18.0 r36h6115d3f_1003
r-gdtools 0.2.2 r36h36050f4_1
r-generics 0.0.2 r36h6115d3f_1003
r-geor 1.8_1 r36hcdcec82_1
r-ggplot2 3.3.2 r36h6115d3f_0
r-ggpubr 0.4.0 r36h6115d3f_0
r-ggrepel 0.8.2 r36h0357c0b_1
r-ggsci 2.9 r36h6115d3f_1003
r-ggsignif 0.6.0 r36h6115d3f_1
r-ggthemes 4.2.0 r36h6115d3f_2
r-ggvis 0.4.6 r36h142f84f_0
r-gh 1.1.0 r36h6115d3f_1
r-git2r 0.27.1 r36h7253d3a_0
r-glmnet 4.0_2 r36h9bbef5b_0
r-globals 0.13.0 r36h6115d3f_0
r-glue 1.4.2 r36hcdcec82_0
r-gmodels 2.18.1 r36_1003
r-golem 0.2.1 r36h6115d3f_1
r-gower 0.2.2 r36hcdcec82_0
r-gplots 3.1.0 r36h6115d3f_0
r-gridextra 2.3 r36h6115d3f_1003
r-grplasso 0.4_7 r36_0
r-gstat 2.0_6 r36hcdcec82_0
r-gsubfn 0.7 r36h6115d3f_1002
r-gtable 0.3.0 r36h6115d3f_3
r-gtools 3.8.2 r36hcdcec82_1
r-haven 2.3.1 r36hde08347_0
r-here 0.1 r36h6115d3f_1003
r-hexbin 1.28.1 r36h9bbef5b_1
r-highr 0.8 r36h6115d3f_2
r-hmisc 4.4_1 r36h9bbef5b_0
r-hms 0.5.3 r36h6115d3f_1
r-hrbrthemes 0.8.0 r36h6115d3f_1
r-htmltable 2.1.0 r36h6115d3f_0
r-htmltools 0.5.0 r36h0357c0b_0
r-htmlwidgets 1.5.2 r36h142f84f_0
r-httpuv 1.5.4 r36h0357c0b_0
r-httr 1.4.2 r36h6115d3f_0
r-hunspell 3.0 r36h0357c0b_1002
r-igraph 1.2.5 r36hd626d4e_1
r-iml 0.10.1 r36h6115d3f_0
r-ini 0.3.1 r36h6115d3f_1003
r-intervals 0.15.2 r36h0357c0b_1
r-inum 1.0_1 r36h6115d3f_2
r-ipred 0.9_9 r36hcdcec82_2
r-isoband 0.2.2 r36h0357c0b_0
r-iterators 1.0.12 r36h6115d3f_1
r-jpeg 0.1_8.1 r36hcdcec82_1
r-jsonlite 1.7.1 r36hcdcec82_0
r-kableextra 1.2.1 r36h6115d3f_0
r-kendall 2.2 r36ha65eedd_0
r-keras 2.3.0.0 r36h6115d3f_0
r-kernlab 0.9_29 r36h51c796c_2
r-kernsmooth 2.23_17 r36hfa343cc_1
r-knitr 1.30 r36h6115d3f_0
r-labeling 0.3 r36h6115d3f_1003
r-labelled 2.7.0 r36h6115d3f_0
r-later 1.1.0.1 r36h0357c0b_0
r-lattice 0.20_41 r36hcdcec82_2
r-latticeextra 0.6_29 r36h6115d3f_1
r-lava 1.6.8 r36h6115d3f_0
r-lazyeval 0.2.2 r36hcdcec82_2
r-leaps 3.1 r36h9bbef5b_1
r-libcoin 1.0_6 r36h7fa42b6_0
r-lifecycle 0.2.0 r36h6115d3f_1
r-listenv 0.8.0 r36h6115d3f_1
r-lme4 1.1_23 r36h0357c0b_1
r-lmtest 0.9_38 r36h9bbef5b_0
r-lpsolve 5.6.15 r36hcdcec82_1
r-lsei 1.3_0 r36h6e990d7_0
r-lsmeans 2.30_0 r36h6115d3f_2
r-lubridate 1.7.9 r36h0357c0b_0
r-magrittr 1.5 r36h6115d3f_1003
r-manipulatewidget 0.10.1 r36h6115d3f_1
r-maps 3.3.0 r36hcdcec82_1004
r-maptools 1.0_2 r36hcdcec82_0
r-markdown 1.1 r36hcdcec82_1
r-mass 7.3_53 r36hcdcec82_0
r-matrix 1.2_18 r36h7fa42b6_3
r-matrixmodels 0.4_1 r36h6115d3f_1003
r-matrixstats 0.57.0 r36hcdcec82_0
r-memoise 1.1.0 r36h6115d3f_1004
r-metrics 0.1.4 r36h6115d3f_1002
r-mgcv 1.8_33 r36h7fa42b6_0
r-microbenchmark 1.4_7 r36hcdcec82_1
r-mime 0.9 r36hcdcec82_1
r-minicran 0.2.14 r36h6115d3f_0
r-miniui 0.1.1.1 r36h6115d3f_1002
r-minqa 1.2.4 r36h6786f55_1005
r-mlr 2.17.1 r36hcdcec82_1
r-modelmetrics 1.2.2.2 r36h0357c0b_1
r-modelr 0.1.8 r36h6115d3f_0
r-modeltools 0.2_23 r36h6115d3f_1
r-moments 0.14 r36_1003
r-multcomp 1.4_14 r36h6115d3f_0
r-munsell 0.5.0 r36h6115d3f_1003
r-mvtnorm 1.1_1 r36h9bbef5b_0
r-network 1.16.0 r36hcdcec82_1
r-networkd3 0.4 r36h6115d3f_1004
r-nlme 3.1_149 r36h9bbef5b_0
r-nloptr 1.2.2.2 r36h0357c0b_0
r-nlp 0.2_0 r36h6115d3f_2
r-nnet 7.3_14 r36hcdcec82_1
r-npsurv 0.5_0 r36h6115d3f_0
r-numderiv 2016.8_1.1 r36h6115d3f_3
r-odbc 1.2.3 r36h0357c0b_0
r-openssl 1.4.3 r36he5c4762_0
r-openxlsx 4.2.2 r36h0357c0b_0
r-orcutt 2.3 r36h6115d3f_0
r-parallelmap 1.5.0 r36h6115d3f_1
r-paramhelpers 1.14 r36hcdcec82_1
r-party 1.3_5 r36h516909a_0
r-partykit 1.2_9 r36hcdcec82_0
r-pbkrtest 0.4_8.6 r36h6115d3f_0
r-penalized 0.9_51 r36h51c796c_1005
r-permute 0.9_5 r36h6115d3f_3
r-pillar 1.4.6 r36h6115d3f_0
r-piper 0.6.1.3 r36h6115d3f_0
r-pixmap 0.4_11 r36h6115d3f_1003
r-pkgbuild 1.1.0 r36h6115d3f_0
r-pkgconfig 2.0.3 r36h6115d3f_1
r-pkgload 1.1.0 r36h0357c0b_0
r-plogr 0.2.0 r36h6115d3f_1003
r-plotly 4.9.2.1 r36h6115d3f_1
r-plotmo 3.6.0 r36h6115d3f_0
r-plotrix 3.7_8 r36h6115d3f_1
r-plumber 1.0.0 r36h6115d3f_0
r-plyr 1.8.6 r36h0357c0b_1
r-pmml 2.0.0 r36h6115d3f_0
r-png 0.1_7 r36hcdcec82_1004
r-polynom 1.4_0 r36h6115d3f_2
r-praise 1.0.0 r36h6115d3f_1004
r-prediction 0.3.14 r36h6115d3f_2
r-prettyunits 1.1.1 r36h6115d3f_1
r-proc 1.16.2 r36h0357c0b_1
r-processx 3.4.4 r36hcdcec82_0
r-prodlim 2019.11.13 r36h0357c0b_1
r-progress 1.2.2 r36h6115d3f_2
r-progressr 0.6.0 r36h6115d3f_1
r-promises 1.1.1 r36h0357c0b_0
r-proto 1.0.0 r36_2003
r-prroc 1.3.1 r36_1002
r-ps 1.3.4 r36hcdcec82_0
r-purrr 0.3.4 r36hcdcec82_1
r-quadprog 1.5_8 r36hfa343cc_2
r-quantmod 0.4.17 r36h6115d3f_1
r-quantreg 5.73 r36hb7af6a2_0
r-questionr 0.7.2 r36h6115d3f_0
r-r.cache 0.14.0 r36h6115d3f_1
r-r.methodss3 1.8.1 r36h6115d3f_0
r-r.oo 1.24.0 r36h6115d3f_0
r-r.utils 2.10.1 r36h6115d3f_0
r-r2d3 0.2.3 r36h6115d3f_1002
r-r6 2.4.1 r36h6115d3f_1
r-randomfields 3.3.8 r36h0357c0b_1
r-randomfieldsutils 0.5.3 r36h6786f55_3
r-randomforest 4.6_14 r36h9bbef5b_1003
r-randtoolbox 1.30.1 r36h9bbef5b_1
r-ranger 0.12.1 r36h0357c0b_1
r-rappdirs 0.3.1 r36hcdcec82_1004
r-rcmdcheck 1.3.3 r36h6115d3f_3
r-rcolorbrewer 1.1_2 r36h6115d3f_1003
r-rcpp 1.0.5 r36h0357c0b_0
r-rcpparmadillo 0.9.900.3.0 r36h51c796c_0
r-rcppeigen 0.3.3.7.0 r36h51c796c_2
r-rcpproll 0.3.0 r36h0357c0b_1002
r-rcurl 1.98_1.2 r36hcdcec82_1
r-readr 1.3.1 r36h0357c0b_1004
r-readxl 1.3.1 r36hde08347_4
r-recipes 0.1.13 r36h6115d3f_0
r-rematch 1.0.1 r36h6115d3f_1003
r-rematch2 2.1.2 r36h6115d3f_1
r-remotes 2.2.0 r36h6115d3f_0
r-renv 0.12.0 r36h6115d3f_0
r-reprex 0.3.0 r36h6115d3f_2
r-reshape 0.8.8 r36hcdcec82_2
r-reshape2 1.4.4 r36h0357c0b_1
r-reticulate 1.16 r36h0357c0b_0
r-rex 1.2.0 r36h6115d3f_1
r-rgl 0.100.54 r36ha687ee4_1
r-rio 0.5.16 r36h6115d3f_1002
r-rjava 0.9_13 r36hcdcec82_3
r-rjdbc 0.2_8 r36h6115d3f_1
r-rlang 0.4.7 r36hcdcec82_0
r-rle 0.9.2 r36h0eb13af_0
r-rlecuyer 0.3_4 r36h96ca727_0
r-rlist 0.4.6.1 r36h6115d3f_1003
r-rmarkdown 2.4 r36h142f84f_0
r-rmdformats 0.3.7 r36h6115d3f_1
r-rngwell 0.10_6 r36hcdcec82_1
r-rocr 1.0_11 r36h6115d3f_1
r-roxygen2 7.1.1 r36h0357c0b_0
r-rpart 4.1_15 r36hcdcec82_2
r-rpart.plot 3.0.9 r36h6115d3f_0
r-rprojroot 1.3_2 r36h6115d3f_1003
r-rsqlite 2.2.1 r36h1b71b39_0
r-rstatix 0.6.0 r36h6115d3f_0
r-rstudioapi 0.11 r36h6115d3f_1
r-rttf2pt1 1.3.8 r36hcdcec82_1
r-rversions 2.0.2 r36h6115d3f_0
r-rvest 0.3.6 r36h6115d3f_0
r-sampling 2.8 r36h516909a_1003
r-sandwich 3.0_0 r36h142f84f_0
r-scales 1.1.1 r36h6115d3f_0
r-scatterplot3d 0.3_41 r36h6115d3f_1003
r-selectr 0.4_2 r36h6115d3f_1
r-sessioninfo 1.1.1 r36h6115d3f_1002
r-sfsmisc 1.1_7 r36h6115d3f_0
r-shape 1.4.5 r36_0
r-shiny 1.5.0 r36h6115d3f_0
r-shinywidgets 0.5.3 r36h6115d3f_0
r-slam 0.1_47 r36hc57f18f_2
r-smotefamily 1.3.1 r36h6115d3f_3
r-sna 2.5 r36hcdcec82_1
r-snow 0.4_3 r36h6115d3f_1002
r-snowballc 0.7.0 r36hcdcec82_1
r-sodium 1.1 r36hcdcec82_1002
r-sourcetools 0.1.7 r36he1b5a44_1002
r-sp 1.4_2 r36hcdcec82_0
r-spacetime 1.2_3 r36h6115d3f_1
r-spam 2.5_1 r36hbf399a0_2
r-sparsem 1.78 r36h9bbef5b_1
r-spatial 7.3_12 r36hcdcec82_1
r-speedglm 0.3_2 r36_1003
r-splancs 2.01_40 r36h9bbef5b_1005
r-splitstackshape 1.4.8 r36h6115d3f_2
r-sqldf 0.4_11 r36h6115d3f_2
r-squarem 2020.4 r36h6115d3f_0
r-startupmsg 0.9.6 r36h6115d3f_2
r-statmod 1.4.34 r36h6e990d7_1
r-statnet.common 4.4.1 r36h0eb13af_0
r-stringi 1.5.3 r36h604b29c_0
r-stringr 1.4.0 r36h6115d3f_2
r-strucchange 1.5_2 r36hcdcec82_1
r-styler 1.3.2 r36h6115d3f_1
r-suppdists 1.1_9.5 r36h0357c0b_1
r-survival 3.2_7 r36hcdcec82_0
r-swagger 3.33.1 r36h142f84f_0
r-sys 3.4 r36hcdcec82_0
r-systemfonts 0.3.2 r36h7563bbe_0
r-teachingdemos 2.12 r36h6115d3f_1
r-tensorflow 2.2.0 r36h6115d3f_0
r-testthat 2.3.2 r36h0357c0b_1
r-tfruns 1.4 r36h6115d3f_1002
r-th.data 1.0_10 r36h6115d3f_2
r-tibble 3.0.3 r36hcdcec82_0
r-tidyr 1.1.2 r36h0357c0b_0
r-tidyselect 1.1.0 r36h6115d3f_0
r-tidyverse 1.3.0 r36h6115d3f_2
r-timedate 3043.102 r36h6115d3f_1002
r-tinytex 0.26 r36h6115d3f_0
r-tm 0.7_7 r36h0357c0b_1
r-tree 1.0_40 r36hcdcec82_1
r-tseries 0.10_47 r36hfa343cc_4
r-tsibble 0.9.2 r36h6115d3f_0
r-ttr 0.24.2 r36hcdcec82_0
r-urca 1.3_0 r36h9bbef5b_1005
r-usethis 1.6.3 r36h6115d3f_0
r-utf8 1.1.4 r36hcdcec82_1003
r-vctrs 0.3.4 r36hcdcec82_0
r-vegan 2.5_6 r36hbf399a0_2
r-viridis 0.5.1 r36h6115d3f_1004
r-viridislite 0.3.0 r36h6115d3f_1003
r-vroom 1.3.2 r36h1b71b39_0
r-webshot 0.5.2 r36h6115d3f_1
r-webutils 1.1 r36hcdcec82_1
r-whisker 0.4 r36h6115d3f_1
r-withr 2.3.0 r36h6115d3f_0
r-wordcloud2 0.2.1 r36h6115d3f_0
r-xfun 0.18 r36hcdcec82_0
r-xlsx 0.6.4.2 r36h6115d3f_0
r-xlsxjars 0.6.1 r36h6115d3f_3
r-xml 3.99_0.3 r36hcdcec82_1
r-xml2 1.3.2 r36h0357c0b_1
r-xopen 1.0.0 r36h6115d3f_1003
r-xtable 1.8_4 r36h6115d3f_3
r-xts 0.12.1 r36hcdcec82_0
r-yaml 2.2.1 r36hcdcec82_1
r-zeallot 0.1.0 r36h6115d3f_1002
r-zip 2.1.1 r36hcdcec82_0
r-zoo 1.8_8 r36hcdcec82_0
readline 8.0 he28a2e2_2
requests 2.24.0 pyh9f0ad1d_0
ruamel_yaml 0.15.80 py38h1e0a361_1002
sed 4.8 hbfbb72e_0
setuptools 49.6.0 py38h32f6830_1
six 1.15.0 pyh9f0ad1d_0
sqlite 3.33.0 h4cf870e_0
sysroot_linux-64 2.12 h77966d4_13
tk 8.6.10 hed695b0_0
tktable 2.10 h555a92e_3
tqdm 4.50.0 pyh9f0ad1d_0
unixodbc 2.3.9 h0e019cf_0
urllib3 1.25.10 py_0
wheel 0.35.1 pyh9f0ad1d_0
xorg-kbproto 1.0.7 h14c3975_1002
xorg-libice 1.0.10 h516909a_0
xorg-libsm 1.2.3 h84519dc_1000
xorg-libx11 1.6.12 h516909a_0
xorg-libxau 1.0.9 h14c3975_0
xorg-libxdmcp 1.1.3 h516909a_0
xorg-libxext 1.3.4 h516909a_0
xorg-libxrender 0.9.10 h516909a_1002
xorg-renderproto 0.11.1 h14c3975_1002
xorg-xextproto 7.3.0 h14c3975_1002
xorg-xproto 7.0.31 h14c3975_1007
xz 5.2.5 h516909a_1
yaml 0.2.5 h516909a_0
zlib 1.2.11 h516909a_1009
zstd 1.4.5 h6597ccf_2
I finally found a solution. GCC 4.9 introduces a newer C++ ABI
So two solution can solve the problem :
Be careful after solving this problem, a new problem appear with the libuuid.so.1 version. I think the best thing to do is to update environment to RHEL8.
Regards,
From @dturaev on February 23, 2018 16:27
Hi, I'm running a virtualbox with CentOS7. Rstudio server runs nicely with yum-installed R. However, when the R version is switched to conda's R, there's a problem.
and when the server is contacted through the browser, an error box says "Unable to connect to service". Apparently conda's R can't see the newer libstdc++ version that comes with anaconda?
Copied from original issue: conda/conda#6927