Closed letmaik closed 6 years ago
I can confirm this also breaks fiona / geopandas (using gdal under the hood of course) in a fresh environment:
conda create -n geopandas-test geopandas -c defaults
joris@joris-XPS-13-9350:~/scipy$ act geopandas-test
(geopandas-test) joris@joris-XPS-13-9350:~/scipy$ conda list
# packages in environment at /home/joris/miniconda3/envs/geopandas-test:
#
# Name Version Build Channel
blas 1.0 mkl
bzip2 1.0.6 h14c3975_5
ca-certificates 2018.03.07 0
cairo 1.14.12 h7636065_2
certifi 2018.4.16 py36_0
click 6.7 py36h5253387_0
click-plugins 1.0.3 py36_0
cligj 0.4.0 py36_0
curl 7.60.0 h84994c4_0
cycler 0.10.0 py36h93f1223_0
dbus 1.13.2 h714fa37_1
descartes 1.1.0 py36h2f9c1c0_0
expat 2.2.5 he0dffb1_0
fiona 1.7.10 py36h48a52f0_0
fontconfig 2.12.6 h49f89f6_0
freetype 2.8 hab7d2ae_1
freexl 1.0.5 h14c3975_0
gdal 2.2.2 py36hc209d97_1
geopandas 0.3.0 py36h2f9c1c0_0
geos 3.6.2 heeff764_2
giflib 5.1.4 h26a3ec6_1
glib 2.56.1 h000015b_0
gst-plugins-base 1.14.0 hbbd80ab_1
gstreamer 1.14.0 hb453b48_1
hdf4 4.2.13 h3ca952b_2
hdf5 1.10.1 h9caa474_1
icu 58.2 h9c2bf20_1
intel-openmp 2018.0.0 8
jpeg 9b h024ee3a_2
json-c 0.12.1 ha6a3662_2
kealib 1.4.7 h79811e5_5
kiwisolver 1.0.1 py36h764f252_0
krb5 1.16 h3f6afd0_6
libboost 1.65.1 habcd387_4
libcurl 7.60.0 h1ad7b7a_0
libdap4 3.19.0 h5bd89bb_2
libedit 3.1.20170329 h6b74fdf_2
libffi 3.2.1 hd88cf55_4
libgcc-ng 7.2.0 hdf63c60_3
libgdal 2.2.2 h804cdde_1
libgfortran-ng 7.2.0 hdf63c60_3
libkml 1.3.0 h9d32c78_3
libnetcdf 4.4.1.1 h816af47_8
libpng 1.6.34 hb9fc6fc_0
libpq 10.3 h1ad7b7a_0
libspatialindex 1.8.5 h20b78c2_2
libspatialite 4.3.0a h72746d6_18
libssh2 1.8.0 h9cfc8f7_4
libstdcxx-ng 7.2.0 hdf63c60_3
libtiff 4.0.9 he85c1e1_1
libuuid 1.0.3 h1bed415_2
libxcb 1.13 h1bed415_1
libxml2 2.9.8 h26e45fe_1
matplotlib 2.2.2 py36h0e671d2_1
mkl 2018.0.2 1
mkl_fft 1.0.1 py36h3010b51_0
mkl_random 1.0.1 py36h629b387_0
munch 2.3.2 py36_0
ncurses 6.1 hf484d3e_0
numpy 1.14.3 py36hcd700cb_1
numpy-base 1.14.3 py36h9be14a7_1
openjpeg 2.3.0 h05c96fa_1
openssl 1.0.2o h20670df_0
pandas 0.23.0 py36h637b7d7_0
pcre 8.42 h439df22_0
pixman 0.34.0 hceecf20_3
poppler 0.65.0 ha54bb34_0
poppler-data 0.4.9 0
proj4 4.9.3 hc8507d1_7
psycopg2 2.7.4 py36hb7f436b_0
pyparsing 2.2.0 py36hee85983_1
pyproj 1.9.5.1 py36_0
pyqt 5.9.2 py36h751905a_0
pysal 1.14.3 py36_0
python 3.6.5 hc3d631a_2
python-dateutil 2.7.3 py36_0
pytz 2018.4 py36_0
qt 5.9.5 h7e424d6_0
readline 7.0 ha6073c6_4
rtree 0.8.3 py36h2f9c1c0_0
scipy 1.1.0 py36hfc37229_0
setuptools 39.1.0 py36_0
shapely 1.6.4 py36h0c48222_0
sip 4.19.8 py36hf484d3e_0
six 1.11.0 py36h372c433_1
sqlalchemy 1.2.7 py36h6b74fdf_0
sqlite 3.23.1 he433501_0
tk 8.6.7 hc745277_3
tornado 5.0.2 py36_0
xerces-c 3.2.1 hac72e42_0
xz 5.2.4 h14c3975_4
zlib 1.2.11 ha838bed_2
(geopandas-test) joris@joris-XPS-13-9350:~/scipy$ python
Python 3.6.5 |Anaconda, Inc.| (default, Apr 29 2018, 16:14:56)
[GCC 7.2.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import geopandas
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/joris/miniconda3/envs/geopandas-test/lib/python3.6/site-packages/geopandas/__init__.py", line 4, in <module>
from geopandas.io.file import read_file
File "/home/joris/miniconda3/envs/geopandas-test/lib/python3.6/site-packages/geopandas/io/file.py", line 3, in <module>
import fiona
File "/home/joris/miniconda3/envs/geopandas-test/lib/python3.6/site-packages/fiona/__init__.py", line 69, in <module>
from fiona.collection import Collection, BytesCollection, vsi_path
File "/home/joris/miniconda3/envs/geopandas-test/lib/python3.6/site-packages/fiona/collection.py", line 9, in <module>
from fiona.ogrext import Iterator, ItemsIterator, KeysIterator
ImportError: libpoppler.so.71: cannot open shared object file: No such file or directory
>>>
Thanks for reporting. One or more of our constraints appears to be too loose or incorrectly pinned. We'll investigate how this is happening.
Indeed, poppler changed its soname at 0.62, and our libgdal package was built with 0.60.1, with a constraint for only the next major version. We'll rebuild our libgdal package.
I'm new to Python but I guess I have the same error:
runfile('/media/mattes/data1/dataDMattes/Code/Python/PythonProgram/main.py', wdir='/media/mattes/data1/dataDMattes/Code/Python/PythonProgram')
Traceback (most recent call last):
File "<ipython-input-1-e8fdc416f3c8>", line 1, in <module>
runfile('/media/mattes/data1/dataDMattes/Code/Python/PythonProgram/main.py', wdir='/media/mattes/data1/dataDMattes/Code/Python/PythonProgram')
File "/home/mattes/anaconda3/lib/python3.6/site-packages/spyder/utils/site/sitecustomize.py", line 705, in runfile
execfile(filename, namespace)
File "/home/mattes/anaconda3/lib/python3.6/site-packages/spyder/utils/site/sitecustomize.py", line 102, in execfile
exec(compile(f.read(), filename, 'exec'), namespace)
File "/media/mattes/data1/dataDMattes/Code/Python/PythonProgram/main.py", line 16, in <module>
import ogr
File "/home/mattes/anaconda3/lib/python3.6/site-packages/ogr.py", line 2, in <module>
from osgeo.gdal import deprecation_warn
File "/home/mattes/anaconda3/lib/python3.6/site-packages/osgeo/__init__.py", line 21, in <module>
_gdal = swig_import_helper()
File "/home/mattes/anaconda3/lib/python3.6/site-packages/osgeo/__init__.py", line 17, in swig_import_helper
_mod = imp.load_module('_gdal', fp, pathname, description)
File "/home/mattes/anaconda3/lib/python3.6/imp.py", line 243, in load_module
return load_dynamic(name, filename, file)
File "/home/mattes/anaconda3/lib/python3.6/imp.py", line 343, in load_dynamic
return _load(spec)
ImportError: libpoppler.so.71: cannot open shared object file: No such file or directory
The output of my conda list
is:
# packages in environment at /home/mattes/anaconda3:
#
_ipyw_jlab_nb_ext_conf 0.1.0 py36he11e457_0 https://repo.continuum.io/pkgs/main
ad3 2.1 <pip>
alabaster 0.7.10 py36h306e16b_0 https://repo.continuum.io/pkgs/main
anaconda custom py36hbbc8b67_0 anaconda
anaconda-client 1.6.14 py36_0 https://repo.anaconda.com/pkgs/main
anaconda-navigator 1.8.5 py36_0 https://repo.anaconda.com/pkgs/main
anaconda-project 0.8.2 py36h44fb852_0 https://repo.continuum.io/pkgs/main
asn1crypto 0.24.0 py36_0 https://repo.continuum.io/pkgs/main
astroid 1.6.1 py36_0 https://repo.continuum.io/pkgs/main
astropy 2.0.3 py36h14c3975_0 https://repo.continuum.io/pkgs/main
attrs 17.4.0 py36_0 https://repo.continuum.io/pkgs/main
babel 2.5.3 py36_0 https://repo.continuum.io/pkgs/main
backports 1.0 py36hfa02d7e_1 https://repo.continuum.io/pkgs/main
backports.shutil_get_terminal_size 1.0.0 py36hfea85ff_2 https://repo.continuum.io/pkgs/main
beautifulsoup4 4.6.0 py36h49b8c8c_1 https://repo.continuum.io/pkgs/main
bitarray 0.8.1 py36h14c3975_1 https://repo.continuum.io/pkgs/main
bkcharts 0.2 py36h735825a_0 https://repo.continuum.io/pkgs/main
blaze 0.11.3 py36h4e06776_0 https://repo.continuum.io/pkgs/main
bleach 2.1.2 py36_0 https://repo.continuum.io/pkgs/main
bokeh 0.12.13 py36h2f9c1c0_0 https://repo.continuum.io/pkgs/main
boost 1.66.0 py36_1 conda-forge
boost-cpp 1.66.0 1 conda-forge
boto 2.48.0 py36h6e4cd66_1 https://repo.continuum.io/pkgs/main
bottleneck 1.2.1 py36haac1ea0_0 https://repo.continuum.io/pkgs/main
bzip2 1.0.6 h9a117a8_4 https://repo.continuum.io/pkgs/main
ca-certificates 2016.2.28 1 conda-forge/label/broken
cairo 1.14.10 0 conda-forge
certifi 2018.4.16 py36_0 conda-forge
cffi 1.11.4 py36h9745a5d_0 https://repo.continuum.io/pkgs/main
chardet 3.0.4 py36h0f667ec_1 https://repo.continuum.io/pkgs/main
click 6.7 py36h5253387_0 https://repo.continuum.io/pkgs/main
click-plugins 1.0.3 <pip>
cligj 0.4.0 <pip>
cloudpickle 0.5.2 py36_1 https://repo.continuum.io/pkgs/main
clyent 1.2.2 py36h7e57e65_1 https://repo.continuum.io/pkgs/main
colorama 0.3.9 py36h489cec4_0 https://repo.continuum.io/pkgs/main
conda 4.2.16 py36_0 conda-forge/label/broken
conda-build 2.1.18 py36_0 conda-forge
conda-env 2.6.0 h36134e3_1 anaconda
conda-verify 2.0.0 py36h98955d8_0 https://repo.continuum.io/pkgs/main
contextlib2 0.5.5 py36h6c84a62_0 https://repo.continuum.io/pkgs/main
cryptography 2.1.4 py36hd09be54_0 https://repo.continuum.io/pkgs/main
curl 7.58.0 h84994c4_0 https://repo.continuum.io/pkgs/main
cycler 0.10.0 py36h93f1223_0 https://repo.continuum.io/pkgs/main
cython 0.27.3 py36h1860423_0 https://repo.continuum.io/pkgs/main
cytoolz 0.9.0 py36h14c3975_0 https://repo.continuum.io/pkgs/main
dask 0.16.1 py36_0 https://repo.continuum.io/pkgs/main
dask-core 0.16.1 py36_0 https://repo.continuum.io/pkgs/main
datashape 0.5.4 py36h3ad6b5c_0 https://repo.continuum.io/pkgs/main
dbus 1.11.0 0 conda-forge
decorator 4.2.1 py36_0 https://repo.continuum.io/pkgs/main
distributed 1.20.2 py36_0 https://repo.continuum.io/pkgs/main
docutils 0.14 py36hb0f60f5_0 https://repo.continuum.io/pkgs/main
entrypoints 0.2.3 py36h1aec115_2 https://repo.continuum.io/pkgs/main
et_xmlfile 1.0.1 py36hd6bccc3_0 https://repo.continuum.io/pkgs/main
expat 2.2.5 he0dffb1_0 https://repo.continuum.io/pkgs/main
ez-setup 0.9 <pip>
fastcache 1.0.2 py36h14c3975_2 https://repo.continuum.io/pkgs/main
filelock 2.0.13 py36h646ffb5_0 https://repo.continuum.io/pkgs/main
Fiona 1.7.11.post2 <pip>
flask 0.12.2 py36hb24657c_0 https://repo.continuum.io/pkgs/main
flask-cors 3.0.3 py36h2d857d3_0 https://repo.continuum.io/pkgs/main
fontconfig 2.12.4 h88586e7_1 https://repo.continuum.io/pkgs/main
freetype 2.8.1 0 conda-forge
freexl 1.0.5 0 conda-forge
gdal 2.2.2 py36_1 conda-forge/label/broken
geos 3.6.2 1 conda-forge
geotiff 1.4.2 1 conda-forge
get_terminal_size 1.0.0 haa9412d_0 https://repo.continuum.io/pkgs/main
gettext 0.19.8.1 0 conda-forge
gevent 1.2.2 py36h2fe25dc_0 https://repo.continuum.io/pkgs/main
giflib 5.1.4 0 conda-forge
glib 2.55.0 0 conda-forge
glob2 0.6 py36he249c77_0 https://repo.continuum.io/pkgs/main
gmp 6.1.2 h6c8ec71_1 https://repo.continuum.io/pkgs/main
gmpy2 2.0.8 py36hc8893dd_2 https://repo.continuum.io/pkgs/main
graphite2 1.3.10 hf63cedd_1 https://repo.continuum.io/pkgs/main
greenlet 0.4.12 py36h2d503a6_0 https://repo.continuum.io/pkgs/main
gst-plugins-base 1.8.0 0 conda-forge
gstreamer 1.8.0 1 conda-forge
h5py 2.7.1 py36h3585f63_0 https://repo.continuum.io/pkgs/main
harfbuzz 1.7.6 0 conda-forge
hdf4 4.2.13 0 conda-forge
hdf5 1.10.1 h9caa474_1 https://repo.continuum.io/pkgs/main
heapdict 1.0.0 py36_2 https://repo.continuum.io/pkgs/main
html5lib 1.0.1 py36h2f9c1c0_0 https://repo.continuum.io/pkgs/main
icu 58.2 h9c2bf20_1 https://repo.continuum.io/pkgs/main
idna 2.6 py36h82fb2a8_1 https://repo.continuum.io/pkgs/main
imageio 2.2.0 py36he555465_0 https://repo.continuum.io/pkgs/main
imagesize 0.7.1 py36h52d8127_0 https://repo.continuum.io/pkgs/main
intel-openmp 2018.0.0 hc7b2577_8 https://repo.continuum.io/pkgs/main
ipykernel 4.8.0 py36_0 https://repo.continuum.io/pkgs/main
ipython 6.2.1 py36h88c514a_1 https://repo.continuum.io/pkgs/main
ipython_genutils 0.2.0 py36hb52b0d5_0 https://repo.continuum.io/pkgs/main
ipywidgets 7.1.1 py36_0 https://repo.continuum.io/pkgs/main
isort 4.2.15 py36had401c0_0 https://repo.continuum.io/pkgs/main
iteration-utilities 0.7.0 <pip>
itsdangerous 0.24 py36h93cc618_1 https://repo.continuum.io/pkgs/main
jbig 2.1 hdba287a_0 https://repo.continuum.io/pkgs/main
jdcal 1.3 py36h4c697fb_0 https://repo.continuum.io/pkgs/main
jedi 0.11.1 py36_0 https://repo.continuum.io/pkgs/main
jinja2 2.10 py36ha16c418_0 https://repo.continuum.io/pkgs/main
jpeg 9b h024ee3a_2 https://repo.continuum.io/pkgs/main
json-c 0.12.1 0 conda-forge
jsonschema 2.6.0 py36h006f8b5_0 https://repo.continuum.io/pkgs/main
jupyter 1.0.0 py36_4 https://repo.continuum.io/pkgs/main
jupyter_client 5.2.2 py36_0 https://repo.continuum.io/pkgs/main
jupyter_console 5.2.0 py36he59e554_1 https://repo.continuum.io/pkgs/main
jupyter_core 4.4.0 py36h7c827e3_0 https://repo.continuum.io/pkgs/main
jupyterlab 0.31.5 py36_0 https://repo.continuum.io/pkgs/main
jupyterlab_launcher 0.10.2 py36_0 https://repo.continuum.io/pkgs/main
kealib 1.4.7 4 conda-forge
krb5 1.14.6 0 conda-forge
lazy-object-proxy 1.3.1 py36h10fcdad_0 https://repo.continuum.io/pkgs/main
libcurl 7.58.0 h1ad7b7a_0 https://repo.continuum.io/pkgs/main
libdap4 3.19.2 1 conda-forge
libedit 3.1 heed3624_0 https://repo.continuum.io/pkgs/main
libffi 3.2.1 hd88cf55_4 https://repo.continuum.io/pkgs/main
libgcc-ng 7.2.0 h7cc24e2_2 https://repo.continuum.io/pkgs/main
libgdal 2.2.2 h804cdde_1 https://repo.anaconda.com/pkgs/main
libgfortran-ng 7.2.0 h9f7466a_2 https://repo.continuum.io/pkgs/main
libiconv 1.15 0 conda-forge
libkml 1.3.0 6 conda-forge
libnetcdf 4.4.1.1 h816af47_8 https://repo.anaconda.com/pkgs/main
libpng 1.6.34 hb9fc6fc_0 https://repo.continuum.io/pkgs/main
libpq 9.6.6 h4e02ad2_0 https://repo.anaconda.com/pkgs/main
libsodium 1.0.15 hf101ebd_0 https://repo.continuum.io/pkgs/main
libspatialite 4.3.0a 19 conda-forge
libssh2 1.8.0 h9cfc8f7_4 https://repo.continuum.io/pkgs/main
libstdcxx-ng 7.2.0 h7a57d05_2 https://repo.continuum.io/pkgs/main
libtiff 4.0.9 h28f6b97_0 https://repo.continuum.io/pkgs/main
libtool 2.4.6 h544aabb_3 https://repo.continuum.io/pkgs/main
libuuid 1.0.3 h1bed415_2 https://repo.anaconda.com/pkgs/main
libxcb 1.12 hcd93eb1_4 https://repo.continuum.io/pkgs/main
libxml2 2.9.7 h26e45fe_0 https://repo.continuum.io/pkgs/main
libxslt 1.1.32 h1312cb7_0 https://repo.continuum.io/pkgs/main
llvmlite 0.21.0 py36ha241eea_0 https://repo.continuum.io/pkgs/main
locket 0.2.0 py36h787c0ad_1 https://repo.continuum.io/pkgs/main
lxml 4.1.1 py36hf71bdeb_1 https://repo.continuum.io/pkgs/main
lzo 2.10 h49e0be7_2 https://repo.continuum.io/pkgs/main
markupsafe 1.0 py36hd9260cd_1 https://repo.continuum.io/pkgs/main
matlabengineforpython R2018a <pip>
matplotlib 2.1.2 py36h0e671d2_0 https://repo.continuum.io/pkgs/main
mccabe 0.6.1 py36h5ad9710_1 https://repo.continuum.io/pkgs/main
mistune 0.8.3 py36_0 https://repo.continuum.io/pkgs/main
mkl 2018.0.1 h19d6760_4 https://repo.continuum.io/pkgs/main
mkl-service 1.1.2 py36h17a0993_4 https://repo.continuum.io/pkgs/main
mpc 1.0.3 hec55b23_5 https://repo.continuum.io/pkgs/main
mpfr 3.1.5 h11a74b3_2 https://repo.continuum.io/pkgs/main
mpmath 1.0.0 py36hfeacd6b_2 https://repo.continuum.io/pkgs/main
msgpack-python 0.5.1 py36h6bb024c_0 https://repo.continuum.io/pkgs/main
multipledispatch 0.4.9 py36h41da3fb_0 https://repo.continuum.io/pkgs/main
munch 2.3.2 <pip>
navigator-updater 0.2.0 py36_0 anaconda
nbconvert 5.3.1 py36hb41ffb7_0 https://repo.continuum.io/pkgs/main
nbformat 4.4.0 py36h31c9010_0 https://repo.continuum.io/pkgs/main
ncurses 6.0 h9df7e31_2 https://repo.continuum.io/pkgs/main
networkx 2.1 py36_0 https://repo.continuum.io/pkgs/main
nltk 3.2.5 py36h7532b22_0 https://repo.continuum.io/pkgs/main
nose 1.3.7 py36hcdf7029_2 https://repo.continuum.io/pkgs/main
notebook 5.4.0 py36_0 https://repo.continuum.io/pkgs/main
numba 0.36.2 np114py36hc6662d5_0 https://repo.continuum.io/pkgs/main
numexpr 2.6.4 py36hc4a3f9a_0 https://repo.continuum.io/pkgs/main
numpy 1.14.0 py36h3dfced4_1 https://repo.continuum.io/pkgs/main
numpydoc 0.7.0 py36h18f165f_0 https://repo.continuum.io/pkgs/main
odo 0.5.1 py36h90ed295_0 https://repo.continuum.io/pkgs/main
olefile 0.45.1 py36_0 https://repo.continuum.io/pkgs/main
openjpeg 2.3.0 2 conda-forge
openpyxl 2.4.10 py36_0 https://repo.continuum.io/pkgs/main
openssl 1.0.2o 0 conda-forge
packaging 16.8 py36ha668100_1 https://repo.continuum.io/pkgs/main
pandas 0.22.0 py36hf484d3e_0 https://repo.continuum.io/pkgs/main
pandoc 1.19.2.1 hea2e7c5_1 https://repo.continuum.io/pkgs/main
pandocfilters 1.4.2 py36ha6701b7_1 https://repo.continuum.io/pkgs/main
pango 1.41.0 hd475d92_0 https://repo.continuum.io/pkgs/main
parso 0.1.1 py36h35f843b_0 https://repo.continuum.io/pkgs/main
partd 0.3.8 py36h36fd896_0 https://repo.continuum.io/pkgs/main
patchelf 0.9 hf79760b_2 https://repo.continuum.io/pkgs/main
path.py 10.5 py36h55ceabb_0 https://repo.continuum.io/pkgs/main
pathlib2 2.3.0 py36h49efa8e_0 https://repo.continuum.io/pkgs/main
patsy 0.5.0 py36_0 https://repo.continuum.io/pkgs/main
pcre 8.41 hc27e229_1 https://repo.continuum.io/pkgs/main
pep8 1.7.1 py36_0 https://repo.continuum.io/pkgs/main
pexpect 4.3.1 py36_0 https://repo.continuum.io/pkgs/main
pickleshare 0.7.4 py36h63277f8_0 https://repo.continuum.io/pkgs/main
pillow 5.0.0 py36h3deb7b8_0 https://repo.continuum.io/pkgs/main
pip 10.0.1 <pip>
pip 9.0.1 py36h6c6f9ce_4 https://repo.continuum.io/pkgs/main
pixman 0.34.0 hceecf20_3 https://repo.continuum.io/pkgs/main
pkginfo 1.4.1 py36h215d178_1 https://repo.continuum.io/pkgs/main
pluggy 0.6.0 py36hb689045_0 https://repo.continuum.io/pkgs/main
ply 3.10 py36hed35086_0 https://repo.continuum.io/pkgs/main
poppler 0.61.1 3 conda-forge
poppler-data 0.4.9 0 conda-forge
proj4 4.9.3 5 conda-forge
prompt_toolkit 1.0.15 py36h17d85b1_0 https://repo.continuum.io/pkgs/main
psutil 5.4.3 py36h14c3975_0 https://repo.continuum.io/pkgs/main
ptyprocess 0.5.2 py36h69acd42_0 https://repo.continuum.io/pkgs/main
py 1.5.2 py36h29bf505_0 https://repo.continuum.io/pkgs/main
pycodestyle 2.3.1 py36hf609f19_0 https://repo.continuum.io/pkgs/main
pycosat 0.6.3 py36h0a5515d_0 https://repo.continuum.io/pkgs/main
pycparser 2.18 py36hf9f622e_1 https://repo.continuum.io/pkgs/main
pycrypto 2.6.1 py36h14c3975_7 https://repo.continuum.io/pkgs/main
pycurl 7.43.0.1 py36hb7f436b_0 https://repo.continuum.io/pkgs/main
pyflakes 1.6.0 py36h7bd6a15_0 https://repo.continuum.io/pkgs/main
pygments 2.2.0 py36h0d3125c_0 https://repo.continuum.io/pkgs/main
pylint 1.8.2 py36_0 https://repo.continuum.io/pkgs/main
pyodbc 4.0.22 py36hf484d3e_0 https://repo.continuum.io/pkgs/main
pyopenssl 17.5.0 py36h20ba746_0 https://repo.continuum.io/pkgs/main
pyparsing 2.2.0 py36hee85983_1 https://repo.continuum.io/pkgs/main
pyproj 1.9.5.1 <pip>
pyqt 5.6.0 py36h0386399_5 https://repo.continuum.io/pkgs/main
pyshp 1.2.12 <pip>
pysocks 1.6.7 py36hd97a5b1_1 https://repo.continuum.io/pkgs/main
pystruct 0.2.4 <pip>
pytables 3.4.2 py36h3b5282a_2 https://repo.continuum.io/pkgs/main
pytest 3.3.2 py36_0 https://repo.continuum.io/pkgs/main
python 3.6.4 hc3d631a_1 https://repo.continuum.io/pkgs/main
python-dateutil 2.6.1 py36h88d3b88_1 https://repo.continuum.io/pkgs/main
pytz 2017.3 py36h63b9c63_0 https://repo.continuum.io/pkgs/main
pywavelets 0.5.2 py36he602eb0_0 https://repo.continuum.io/pkgs/main
pyyaml 3.12 py36hafb9ca4_1 https://repo.continuum.io/pkgs/main
pyzmq 16.0.3 py36he2533c7_0 https://repo.continuum.io/pkgs/main
qt 5.6.2 7 conda-forge
qtawesome 0.4.4 py36h609ed8c_0 https://repo.continuum.io/pkgs/main
qtconsole 4.3.1 py36h8f73b5b_0 https://repo.continuum.io/pkgs/main
qtpy 1.4.1 py36_0 https://repo.anaconda.com/pkgs/main
readline 7.0 ha6073c6_4 https://repo.continuum.io/pkgs/main
requests 2.18.4 py36he2e5f8d_1 https://repo.continuum.io/pkgs/main
rope 0.10.7 py36h147e2ec_0 https://repo.continuum.io/pkgs/main
ruamel_yaml 0.15.35 py36h14c3975_1 https://repo.continuum.io/pkgs/main
scikit-image 0.13.1 py36h14c3975_1 https://repo.continuum.io/pkgs/main
scikit-learn 0.19.1 py36h7aa7ec6_0 https://repo.continuum.io/pkgs/main
scipy 1.0.0 py36hbf646e7_0 https://repo.continuum.io/pkgs/main
seaborn 0.8.1 py36hfad7ec4_0 https://repo.continuum.io/pkgs/main
send2trash 1.4.2 py36_0 https://repo.continuum.io/pkgs/main
setuptools 39.2.0 <pip>
setuptools 38.4.0 py36_0 https://repo.continuum.io/pkgs/main
Shapely 1.6.4.post1 <pip>
simplegeneric 0.8.1 py36_2 https://repo.continuum.io/pkgs/main
singledispatch 3.4.0.3 py36h7a266c3_0 https://repo.continuum.io/pkgs/main
sip 4.18.1 py36h51ed4ed_2 https://repo.continuum.io/pkgs/main
six 1.11.0 py36h372c433_1 https://repo.continuum.io/pkgs/main
snowballstemmer 1.2.1 py36h6febd40_0 https://repo.continuum.io/pkgs/main
sortedcollections 0.5.3 py36h3c761f9_0 https://repo.continuum.io/pkgs/main
sortedcontainers 1.5.9 py36_0 https://repo.continuum.io/pkgs/main
sphinx 1.6.6 py36_0 https://repo.continuum.io/pkgs/main
sphinxcontrib 1.0 py36h6d0f590_1 https://repo.continuum.io/pkgs/main
sphinxcontrib-websupport 1.0.1 py36hb5cb234_1 https://repo.continuum.io/pkgs/main
spyder 3.2.8 py36_0 https://repo.anaconda.com/pkgs/main
sqlalchemy 1.2.1 py36h14c3975_0 https://repo.continuum.io/pkgs/main
sqlite 3.20.1 0 conda-forge
statsmodels 0.8.0 py36h8533d0b_0 https://repo.continuum.io/pkgs/main
sympy 1.1.1 py36hc6d1c1c_0 https://repo.continuum.io/pkgs/main
tblib 1.3.2 py36h34cf8b6_0 https://repo.continuum.io/pkgs/main
terminado 0.8.1 py36_1 https://repo.continuum.io/pkgs/main
testpath 0.3.1 py36h8cadb63_0 https://repo.continuum.io/pkgs/main
tk 8.6.7 hc745277_3 https://repo.continuum.io/pkgs/main
toolz 0.9.0 py36_0 https://repo.continuum.io/pkgs/main
tornado 4.5.3 py36_0 https://repo.continuum.io/pkgs/main
traitlets 4.3.2 py36h674d592_0 https://repo.continuum.io/pkgs/main
typing 3.6.2 py36h7da032a_0 https://repo.continuum.io/pkgs/main
unicodecsv 0.14.1 py36ha668878_0 https://repo.continuum.io/pkgs/main
unixodbc 2.3.4 hc36303a_1 https://repo.continuum.io/pkgs/main
urllib3 1.22 py36hbe7ace6_0 https://repo.continuum.io/pkgs/main
util-linux 2.21 0
wcwidth 0.1.7 py36hdf4376a_0 https://repo.continuum.io/pkgs/main
webencodings 0.5.1 py36h800622e_1 https://repo.continuum.io/pkgs/main
werkzeug 0.14.1 py36_0 https://repo.continuum.io/pkgs/main
wheel 0.30.0 py36hfd4bba0_1 https://repo.continuum.io/pkgs/main
widgetsnbextension 3.1.0 py36_0 https://repo.continuum.io/pkgs/main
wrapt 1.10.11 py36h28b7045_0 https://repo.continuum.io/pkgs/main
xerces-c 3.2.0 0 conda-forge
xlrd 1.1.0 py36h1db9f0c_1 https://repo.continuum.io/pkgs/main
xlsxwriter 1.0.2 py36h3de1aca_0 https://repo.continuum.io/pkgs/main
xlwt 1.3.0 py36h7b00a1f_0 https://repo.continuum.io/pkgs/main
xz 5.2.3 h55aa19d_2 https://repo.continuum.io/pkgs/main
yaml 0.1.7 had09818_2 https://repo.continuum.io/pkgs/main
zeromq 4.2.2 hbedb6e5_2 https://repo.continuum.io/pkgs/main
zict 0.1.3 py36h3a3bf81_0 https://repo.continuum.io/pkgs/main
zlib 1.2.11 ha838bed_2 https://repo.continuum.io/pkgs/main
We are working on updating and rebuilding gdal today. For now, if you manually downgrade poppler with
conda install "poppler<0.62"
you should be back up and running
Any updates on this?
We have been delayed by the Anaconda 5.2 release. We will be hotfixing our index metadata tonight or tomorrow to correct the immediate problem, and working to rebuild the stack properly soon.
This seems to be fixed now. Thanks!
BROKEN!!!!!
Also broken for me.
Please open a new issue with the information requested by the issue template.
I'm having a similar issue with python gdal 3.0.2 on ubuntu
ImportError: libpoppler.so.91: cannot open shared object file: No such file or directory
also have the same issue with py3.8, rasterio1.2.10 in the year of 2023 ImportError: libpoppler.so.91: cannot open shared object file: No such file or directory
Hello everybody, i am new to the python and linux machine. I am using Ubuntu 22.04.3 LTS operating system, Python 3.11.5 and Conda 23.9.0. While i tried to setup python libraries to run in jupyter notebook i face some serious error as mentioned by other people earlier. I tried to setup GDAL libraries. But i faced error as follows: ImportError Traceback (most recent call last) File ~/anaconda3/envs/jupy/lib/python3.11/site-packages/osgeo/init.py:30, in swig_import_helper() 29 try: ---> 30 return importlib.import_module(mname) 31 except ImportError:
File ~/anaconda3/envs/jupy/lib/python3.11/importlib/init.py:126, in import_module(name, package) 125 level += 1 --> 126 return _bootstrap._gcd_import(name[level:], package, level)
File
File
File
File
File
File
File
ImportError: libpoppler.so.126: cannot open shared object file: No such file or directory
During handling of the above exception, another exception occurred:
ModuleNotFoundError Traceback (most recent call last) Cell In[1], line 1 ----> 1 import osgeo.gdal as gdal
File ~/anaconda3/envs/jupy/lib/python3.11/site-packages/osgeo/init.py:46 42 raise ImportError(traceback_string + '\n' + msg) 43 return importlib.import_module('_gdal') ---> 46 _gdal = swig_import_helper() 47 del swig_import_helper 49 version = _gdal.version = _gdal.VersionInfo("RELEASE_NAME")
File ~/anaconda3/envs/jupy/lib/python3.11/site-packages/osgeo/init.py:43, in swig_import_helper() 41 traceback_string = ''.join(traceback.format_exception(*sys.exc_info())) 42 raise ImportError(traceback_string + '\n' + msg) ---> 43 return importlib.import_module('_gdal')
File ~/anaconda3/envs/jupy/lib/python3.11/importlib/init.py:126, in import_module(name, package) 124 break 125 level += 1 --> 126 return _bootstrap._gcd_import(name[level:], package, level)
ModuleNotFoundError: No module named '_gdal' Can anyone help me to get rid of this problem, i already spend at least 5 days to figure out this problem in my linux machine but its not working for me and i am running out of time for my work.
Actual Behavior
The import of
gdal
fails since a day or two (as part of Travis CI testing using the latest anaconda):Expected Behavior
No errors.
Steps to Reproduce
Anaconda or Miniconda version:
4.5.4
Operating System:
Ubuntu (Travis CI)
conda info
conda list --show-channel-urls
See above.