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CosmiQ / solaris

CosmiQ Works Geospatial Machine Learning Analysis Toolkit
https://solaris.readthedocs.io
Apache License 2.0
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[BUG]: installation always fails #432

Open AWS-Bassem opened 2 years ago

AWS-Bassem commented 2 years ago

g++ -pthread -shared -B /home/ec2-user/anaconda3/envs/py37/compiler_compat -L/home/ec2-user/anaconda3/envs/py37/lib -Wl,-rpath=/home/ec2-user/anaconda3/envs/py37/lib -Wl,--no-as-needed -Wl,--sysroot=/ build/temp.linux-x86_64-3.7/extensions/gnm_wrap.o -L../../.libs -L../../ -L/home/ec2-user/anaconda3/envs/py37/lib -lgdal -o build/lib.linux-x86_64-3.7/osgeo/_gnm.cpython-37m-x86_64-linux-gnu.so /home/ec2-user/anaconda3/envs/py37/compiler_compat/ld: cannot find crti.o: No such file or directory collect2: error: ld returned 1 exit status error: command 'gcc' failed with exit status 1

ERROR: Failed building wheel for gdal Running setup.py clean for gdal Failed to build gdal Installing collected packages: gdal, solaris Attempting uninstall: gdal Found existing installation: GDAL 3.0.2 Uninstalling GDAL-3.0.2: Successfully uninstalled GDAL-3.0.2 Running setup.py install for gdal ... error ERROR: Command errored out with exit status 1: command: /home/ec2-user/anaconda3/envs/py37/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-2wgtjwg8/gdal_5465e3c114f843c8a0d909113819ff34/setup.py'"'"'; file='"'"'/tmp/pip-install-2wgtjwg8/gdal_5465e3c114f843c8a0d909113819ff34/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /tmp/pip-record-uh53hv0g/install-record.txt --single-version-externally-managed --compile --install-headers /home/ec2-user/anaconda3/envs/py37/include/python3.7m/gdal cwd: /tmp/pip-install-2wgtjwg8/gdal_5465e3c114f843c8a0d909113819ff34/ Complete output (778 lines): running install running build running build_py creating build creating build/lib.linux-x86_64-3.7 creating build/lib.linux-x86_64-3.7/osgeo copying osgeo/init.py -> build/lib.linux-x86_64-3.7/osgeo copying osgeo/gdal.py -> build/lib.linux-x86_64-3.7/osgeo copying osgeo/gdal_array.py -> build/lib.linux-x86_64-3.7/osgeo copying osgeo/gdalconst.py -> build/lib.linux-x86_64-3.7/osgeo copying osgeo/gdalnumeric.py -> build/lib.linux-x86_64-3.7/osgeo copying osgeo/gnm.py -> build/lib.linux-x86_64-3.7/osgeo copying osgeo/ogr.py -> build/lib.linux-x86_64-3.7/osgeo copying osgeo/osr.py -> build/lib.linux-x86_64-3.7/osgeo copying osgeo/utils.py -> build/lib.linux-x86_64-3.7/osgeo creating build/lib.linux-x86_64-3.7/osgeo_utils copying gdal-utils/osgeo_utils/init.py -> build/lib.linux-x86_64-3.7/osgeo_utils copying gdal-utils/osgeo_utils/gdal2tiles.py -> build/lib.linux-x86_64-3.7/osgeo_utils copying gdal-utils/osgeo_utils/gdal2xyz.py -> build/lib.linux-x86_64-3.7/osgeo_utils copying gdal-utils/osgeo_utils/gdal_calc.py -> build/lib.linux-x86_64-3.7/osgeo_utils copying gdal-utils/osgeo_utils/gdal_edit.py -> build/lib.linux-x86_64-3.7/osgeo_utils copying gdal-utils/osgeo_utils/gdal_fillnodata.py -> build/lib.linux-x86_64-3.7/osgeo_utils copying gdal-utils/osgeo_utils/gdal_merge.py -> build/lib.linux-x86_64-3.7/osgeo_utils copying gdal-utils/osgeo_utils/gdal_pansharpen.py -> build/lib.linux-x86_64-3.7/osgeo_utils copying gdal-utils/osgeo_utils/gdal_polygonize.py -> build/lib.linux-x86_64-3.7/osgeo_utils copying gdal-utils/osgeo_utils/gdal_proximity.py -> build/lib.linux-x86_64-3.7/osgeo_utils copying gdal-utils/osgeo_utils/gdal_retile.py -> build/lib.linux-x86_64-3.7/osgeo_utils copying gdal-utils/osgeo_utils/gdal_sieve.py -> build/lib.linux-x86_64-3.7/osgeo_utils copying gdal-utils/osgeo_utils/gdalattachpct.py -> build/lib.linux-x86_64-3.7/osgeo_utils copying gdal-utils/osgeo_utils/gdalcompare.py -> build/lib.linux-x86_64-3.7/osgeo_utils copying gdal-utils/osgeo_utils/gdalmove.py -> build/lib.linux-x86_64-3.7/osgeo_utils copying gdal-utils/osgeo_utils/ogrmerge.py -> build/lib.linux-x86_64-3.7/osgeo_utils copying gdal-utils/osgeo_utils/pct2rgb.py -> build/lib.linux-x86_64-3.7/osgeo_utils copying gdal-utils/osgeo_utils/rgb2pct.py -> build/lib.linux-x86_64-3.7/osgeo_utils creating build/lib.linux-x86_64-3.7/osgeo_utils/auxiliary copying gdal-utils/osgeo_utils/auxiliary/init.py -> build/lib.linux-x86_64-3.7/osgeo_utils/auxiliary copying gdal-utils/osgeo_utils/auxiliary/array_util.py -> build/lib.linux-x86_64-3.7/osgeo_utils/auxiliary copying gdal-utils/osgeo_utils/auxiliary/base.py -> build/lib.linux-x86_64-3.7/osgeo_utils/auxiliary copying gdal-utils/osgeo_utils/auxiliary/batch_creator.py -> build/lib.linux-x86_64-3.7/osgeo_utils/auxiliary copying gdal-utils/osgeo_utils/auxiliary/color_palette.py -> build/lib.linux-x86_64-3.7/osgeo_utils/auxiliary copying gdal-utils/osgeo_utils/auxiliary/color_table.py -> build/lib.linux-x86_64-3.7/osgeo_utils/auxiliary copying gdal-utils/osgeo_utils/auxiliary/extent_util.py -> build/lib.linux-x86_64-3.7/osgeo_utils/auxiliary copying gdal-utils/osgeo_utils/auxiliary/gdal_argparse.py -> build/lib.linux-x86_64-3.7/osgeo_utils/auxiliary copying gdal-utils/osgeo_utils/auxiliary/numpy_util.py -> build/lib.linux-x86_64-3.7/osgeo_utils/auxiliary copying gdal-utils/osgeo_utils/auxiliary/osr_util.py -> build/lib.linux-x86_64-3.7/osgeo_utils/auxiliary copying gdal-utils/osgeo_utils/auxiliary/progress.py -> build/lib.linux-x86_64-3.7/osgeo_utils/auxiliary copying gdal-utils/osgeo_utils/auxiliary/raster_creation.py -> build/lib.linux-x86_64-3.7/osgeo_utils/auxiliary copying gdal-utils/osgeo_utils/auxiliary/rectangle.py -> build/lib.linux-x86_64-3.7/osgeo_utils/auxiliary copying gdal-utils/osgeo_utils/auxiliary/util.py -> build/lib.linux-x86_64-3.7/osgeo_utils/auxiliary creating build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/init.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/assemblepoly.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/build_jp2_from_xml.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/classify.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/crs2crs2grid.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/densify.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/dump_jp2.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/epsg_tr.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/esri2wkt.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/fft.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/fix_gpkg.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gcps2ogr.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gcps2vec.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gcps2wld.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gdal2grd.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gdal_auth.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gdal_cp.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gdal_create_pdf.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gdal_ls.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gdal_lut.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gdal_mkdir.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gdal_remove_towgs84.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gdal_rm.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gdal_rmdir.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gdal_vrtmerge.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gdal_zip.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gdalchksum.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gdalcopyproj.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gdalfilter.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gdalident.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gdalimport.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gdalinfo.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/gdallocationinfo.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/get_soundg.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/histrep.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/hsv_merge.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/jpeg_in_tiff_extract.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/load2odbc.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/loslas2ntv2.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/magphase.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/make_fuzzer_friendly_archive.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/mkgraticule.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/ogr2ogr.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/ogr2vrt.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/ogr_build_junction_table.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/ogr_dispatch.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/ogr_layer_algebra.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/ogrinfo.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/ogrupdate.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/rel.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/tigerpoly.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/tile_extent_from_raster.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/tolatlong.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/val_repl.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/validate_cloud_optimized_geotiff.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/validate_gpkg.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/validate_jp2.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/vec_tr.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/vec_tr_spat.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples copying gdal-utils/osgeo_utils/samples/wcs_virtds_params.py -> build/lib.linux-x86_64-3.7/osgeo_utils/samples running build_ext gcc -pthread -B /home/ec2-user/anaconda3/envs/py37/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I../../port -I../../gcore -I../../alg -I../../ogr/ -I../../ogr/ogrsf_frmts -I../../gnm -I../../apps -I/home/ec2-user/anaconda3/envs/py37/include/python3.7m -I/home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/numpy/core/include -I/home/ec2-user/anaconda3/envs/py37/include -c gdal_python_cxx11_test.cpp -o gdal_python_cxx11_test.o gcc -pthread -B /home/ec2-user/anaconda3/envs/py37/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I../../port -I../../gcore -I../../alg -I../../ogr/ -I../../ogr/ogrsf_frmts -I../../gnm -I../../apps -I/home/ec2-user/anaconda3/envs/py37/include/python3.7m -I/home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/numpy/core/include -I/home/ec2-user/anaconda3/envs/py37/include -c gdal_python_cxx11_test.cpp -o gdal_python_cxx11_test.o -std=c++11 building 'osgeo._gdalconst' extension building 'osgeo._gdal' extension creating build/temp.linux-x86_64-3.7 creating build/temp.linux-x86_64-3.7/extensions creating build/temp.linux-x86_64-3.7/extensions gcc -pthread -B /home/ec2-user/anaconda3/envs/py37/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I../../port -I../../gcore -I../../alg -I../../ogr/ -I../../ogr/ogrsf_frmts -I../../gnm -I../../apps -I/home/ec2-user/anaconda3/envs/py37/include/python3.7m -I/home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/numpy/core/include -I/home/ec2-user/anaconda3/envs/py37/include -c extensions/gdalconst_wrap.c -o build/temp.linux-x86_64-3.7/extensions/gdalconst_wrap.o -I/home/ec2-user/anaconda3/envs/py37/include building 'osgeo._osr' extension gcc -pthread -B /home/ec2-user/anaconda3/envs/py37/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I../../port -I../../gcore -I../../alg -I../../ogr/ -I../../ogr/ogrsf_frmts -I../../gnm -I../../apps -I/home/ec2-user/anaconda3/envs/py37/include/python3.7m -I/home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/numpy/core/include -I/home/ec2-user/anaconda3/envs/py37/include -c extensions/gdal_wrap.cpp -o build/temp.linux-x86_64-3.7/extensions/gdal_wrap.o -std=c++11 -I/home/ec2-user/anaconda3/envs/py37/include gcc -pthread -B /home/ec2-user/anaconda3/envs/py37/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I../../port -I../../gcore -I../../alg -I../../ogr/ -I../../ogr/ogrsf_frmts -I../../gnm -I../../apps -I/home/ec2-user/anaconda3/envs/py37/include/python3.7m -I/home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/numpy/core/include -I/home/ec2-user/anaconda3/envs/py37/include -c extensions/osr_wrap.cpp -o build/temp.linux-x86_64-3.7/extensions/osr_wrap.o -std=c++11 -I/home/ec2-user/anaconda3/envs/py37/include building 'osgeo._ogr' extension gcc -pthread -B /home/ec2-user/anaconda3/envs/py37/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I../../port -I../../gcore -I../../alg -I../../ogr/ -I../../ogr/ogrsf_frmts -I../../gnm -I../../apps -I/home/ec2-user/anaconda3/envs/py37/include/python3.7m -I/home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/numpy/core/include -I/home/ec2-user/anaconda3/envs/py37/include -c extensions/ogr_wrap.cpp -o build/temp.linux-x86_64-3.7/extensions/ogr_wrap.o -std=c++11 -I/home/ec2-user/anaconda3/envs/py37/include cc1plus: warning: command line option '-Wstrict-prototypes' is valid for C/ObjC but not for C++ cc1plus: warning: command line option '-Wstrict-prototypes' is valid for C/ObjC but not for C++ cc1plus: warning: command line option '-Wstrict-prototypes' is valid for C/ObjC but not for C++ extensions/gdalconst_wrap.c: In function 'PyInit__gdalconst': extensions/gdalconst_wrap.c:3813:63: error: 'GRIORA_RMS' undeclared (first use in this function) SWIG_Python_SetConstant(d, "GRIORA_RMS",SWIG_From_int((int)(GRIORA_RMS))); ^ extensions/gdalconst_wrap.c:3813:63: note: each undeclared identifier is reported only once for each function it appears in extensions/gdalconst_wrap.c:3839:60: error: 'GRA_RMS' undeclared (first use in this function) SWIG_Python_SetConstant(d, "GRA_RMS",SWIG_From_int((int)(GRA_RMS))); ^ extensions/gdalconst_wrap.c:3846:60: error: 'GRA_Sum' undeclared (first use in this function) SWIG_Python_SetConstant(d, "GRA_Sum",SWIG_From_int((int)(GRA_Sum))); ^ extensions/gdalconst_wrap.c:3882:71: error: 'GDAL_OF_MULTIDIM_RASTER' undeclared (first use in this function) SWIG_Python_SetConstant(d, "OF_MULTIDIM_RASTER",SWIG_From_int((int)(GDAL_OF_MULTIDIM_RASTER))); ^ extensions/gdalconst_wrap.c:3906:68: error: 'GDAL_DCAP_UNIQUE_FIELDS' undeclared (first use in this function) SWIG_Python_SetConstant(d, "DCAP_UNIQUE_FIELDS",SWIG_FromCharPtr(GDAL_DCAP_UNIQUE_FIELDS)); ^ extensions/gdalconst_wrap.c:3907:71: error: 'GDAL_DIM_TYPE_HORIZONTAL_X' undeclared (first use in this function) SWIG_Python_SetConstant(d, "DIM_TYPE_HORIZONTAL_X",SWIG_FromCharPtr(GDAL_DIM_TYPE_HORIZONTAL_X)); ^ extensions/gdalconst_wrap.c:3908:71: error: 'GDAL_DIM_TYPE_HORIZONTAL_Y' undeclared (first use in this function) SWIG_Python_SetConstant(d, "DIM_TYPE_HORIZONTAL_Y",SWIG_FromCharPtr(GDAL_DIM_TYPE_HORIZONTAL_Y)); ^ extensions/gdalconst_wrap.c:3909:67: error: 'GDAL_DIM_TYPE_VERTICAL' undeclared (first use in this function) SWIG_Python_SetConstant(d, "DIM_TYPE_VERTICAL",SWIG_FromCharPtr(GDAL_DIM_TYPE_VERTICAL)); ^ extensions/gdalconst_wrap.c:3910:67: error: 'GDAL_DIM_TYPE_TEMPORAL' undeclared (first use in this function) SWIG_Python_SetConstant(d, "DIM_TYPE_TEMPORAL",SWIG_FromCharPtr(GDAL_DIM_TYPE_TEMPORAL)); ^ extensions/gdalconst_wrap.c:3911:69: error: 'GDAL_DIM_TYPE_PARAMETRIC' undeclared (first use in this function) SWIG_Python_SetConstant(d, "DIM_TYPE_PARAMETRIC",SWIG_FromCharPtr(GDAL_DIM_TYPE_PARAMETRIC)); ^ building 'osgeo._gnm' extension gcc -pthread -B /home/ec2-user/anaconda3/envs/py37/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I../../port -I../../gcore -I../../alg -I../../ogr/ -I../../ogr/ogrsf_frmts -I../../gnm -I../../apps -I/home/ec2-user/anaconda3/envs/py37/include/python3.7m -I/home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/numpy/core/include -I/home/ec2-user/anaconda3/envs/py37/include -c extensions/gnm_wrap.cpp -o build/temp.linux-x86_64-3.7/extensions/gnm_wrap.o -std=c++11 -I/home/ec2-user/anaconda3/envs/py37/include cc1plus: warning: command line option '-Wstrict-prototypes' is valid for C/ObjC but not for C++ extensions/gdal_wrap.cpp:3211:9: error: 'GDALExtendedDataTypeHS' does not name a type typedef GDALExtendedDataTypeHS GDALExtendedDataTypeHS; ^ extensions/gdal_wrap.cpp:3212:9: error: 'GDALEDTComponentHS' does not name a type typedef GDALEDTComponentHS GDALEDTComponentHS; ^ extensions/gdal_wrap.cpp:3213:9: error: 'GDALGroupHS' does not name a type typedef GDALGroupHS GDALGroupHS; ^ extensions/gdal_wrap.cpp:3214:9: error: 'GDALMDArrayHS' does not name a type typedef GDALMDArrayHS GDALMDArrayHS; ^ extensions/gdal_wrap.cpp:3215:9: error: 'GDALAttributeHS' does not name a type typedef GDALAttributeHS GDALAttributeHS; ^ extensions/gdal_wrap.cpp:3216:9: error: 'GDALDimensionHS' does not name a type typedef GDALDimensionHS GDALDimensionHS; ^ extensions/gdal_wrap.cpp: In function 'bool wrapper_VSIUnlinkBatch(char)': extensions/gdal_wrap.cpp:4313:40: error: 'VSIUnlinkBatch' was not declared in this scope int success = VSIUnlinkBatch(files); ^ extensions/gdal_wrap.cpp: In function 'VSILFILE wrapper_VSIFOpenExL(const char, const char, int, char)': extensions/gdal_wrap.cpp:4397:65: error: 'VSIFOpenEx2L' was not declared in this scope return VSIFOpenEx2L( utf8_path, pszMode, bSetError, options ); ^ extensions/gdal_wrap.cpp: In function 'GDALDatasetShadow GDALDriverShadow_CreateMultiDimensional(GDALDriverShadow, const char, char, char)': extensions/gdal_wrap.cpp:4457:73: error: 'GDALCreateMultiDimensional' was not declared in this scope options ); ^ extensions/gdal_wrap.cpp: At global scope: extensions/gdal_wrap.cpp:4899:12: error: 'GDALGroupHS' does not name a type SWIGINTERN GDALGroupHS GDALDatasetShadow_GetRootGroup(GDALDatasetShadow self){ ^ extensions/gdal_wrap.cpp: In function 'OGRErr GDALDatasetShadow_AbortSQL(GDALDatasetShadow)': extensions/gdal_wrap.cpp:5333:36: error: 'GDALDatasetAbortSQL' was not declared in this scope return GDALDatasetAbortSQL(self); ^ extensions/gdal_wrap.cpp: In function 'void GDALDatasetShadow_ClearStatistics(GDALDatasetShadow)': extensions/gdal_wrap.cpp:5345:38: error: 'GDALDatasetClearStatistics' was not declared in this scope GDALDatasetClearStatistics(self); ^ extensions/gdal_wrap.cpp: In function 'OGRFieldDomainShadow GDALDatasetShadow_GetFieldDomain(GDALDatasetShadow, const char)': extensions/gdal_wrap.cpp:5348:72: error: 'GDALDatasetGetFieldDomain' was not declared in this scope return (OGRFieldDomainShadow) GDALDatasetGetFieldDomain(self, name); ^ extensions/gdal_wrap.cpp: In function 'bool GDALDatasetShadow_AddFieldDomain(GDALDatasetShadow, OGRFieldDomainShadow)': extensions/gdal_wrap.cpp:5351:47: error: 'OGRFieldDomainH' was not declared in this scope return GDALDatasetAddFieldDomain(self, (OGRFieldDomainH)fieldDomain, NULL); ^ extensions/gdal_wrap.cpp:5351:80: error: 'GDALDatasetAddFieldDomain' was not declared in this scope return GDALDatasetAddFieldDomain(self, (OGRFieldDomainH)fieldDomain, NULL); ^ extensions/gdal_wrap.cpp: At global scope: extensions/gdal_wrap.cpp:5453:36: error: variable or field 'delete_GDALGroupHS' declared void SWIGINTERN void delete_GDALGroupHS(GDALGroupHS self){ ^ extensions/gdal_wrap.cpp:5453:36: error: 'GDALGroupHS' was not declared in this scope extensions/gdal_wrap.cpp:5453:49: error: 'self' was not declared in this scope SWIGINTERN void delete_GDALGroupHS(GDALGroupHS self){ ^ extensions/gdal_wrap.cpp:5456:44: error: 'GDALGroupHS' was not declared in this scope SWIGINTERN char const GDALGroupHS_GetName(GDALGroupHS self){ ^ extensions/gdal_wrap.cpp:5456:57: error: 'self' was not declared in this scope SWIGINTERN char const GDALGroupHS_GetName(GDALGroupHS self){ ^ extensions/gdal_wrap.cpp:5456:62: error: expected ',' or ';' before '{' token SWIGINTERN char const GDALGroupHS_GetName(GDALGroupHS self){ ^ extensions/gdal_wrap.cpp:5459:48: error: 'GDALGroupHS' was not declared in this scope SWIGINTERN char const GDALGroupHS_GetFullName(GDALGroupHS self){ ^ extensions/gdal_wrap.cpp:5459:61: error: 'self' was not declared in this scope SWIGINTERN char const GDALGroupHS_GetFullName(GDALGroupHS self){ ^ extensions/gdal_wrap.cpp:5459:66: error: expected ',' or ';' before '{' token SWIGINTERN char const GDALGroupHS_GetFullName(GDALGroupHS *self){ ^ extensions/gdal_wrap.cpp:5462:47: error: 'GDALGroupHS' was not declared in this scope SWIGINTERN char GDALGroupHS_GetMDArrayNames(GDALGroupHS self,char options=0){ ^ extensions/gdal_wrap.cpp:5462:60: error: 'self' was not declared in this scope SWIGINTERN char GDALGroupHS_GetMDArrayNames(GDALGroupHS self,char options=0){ ^ extensions/gdal_wrap.cpp:5462:65: error: expected primary-expression before 'char' SWIGINTERN char GDALGroupHS_GetMDArrayNames(GDALGroupHS self,char options=0){ ^ extensions/gdal_wrap.cpp:5462:81: error: expression list treated as compound expression in initializer [-fpermissive] SWIGINTERN char GDALGroupHS_GetMDArrayNames(GDALGroupHS self,char options=0){ ^ extensions/gdal_wrap.cpp:5462:82: error: expected ',' or ';' before '{' token SWIGINTERN char GDALGroupHS_GetMDArrayNames(GDALGroupHS *self,char *options=0){ ^ extensions/gdal_wrap.cpp:5465:12: error: 'GDALMDArrayHS' does not name a type SWIGINTERN GDALMDArrayHS GDALGroupHS_OpenMDArray(GDALGroupHS self,char const name,char options=0){ ^ extensions/gdal_wrap.cpp:5468:12: error: 'GDALMDArrayHS' does not name a type SWIGINTERN GDALMDArrayHS GDALGroupHS_OpenMDArrayFromFullname(GDALGroupHS self,char const *name,char options=0){ ^ extensions/gdal_wrap.cpp:5471:12: error: 'GDALMDArrayHS' does not name a type SWIGINTERN GDALMDArrayHS GDALGroupHS_ResolveMDArray(GDALGroupHS self,char const name,char const starting_point,char options=0){ ^ extensions/gdal_wrap.cpp:5474:45: error: 'GDALGroupHS' was not declared in this scope SWIGINTERN char GDALGroupHS_GetGroupNames(GDALGroupHS self,char options=0){ ^ extensions/gdal_wrap.cpp:5474:58: error: 'self' was not declared in this scope SWIGINTERN char GDALGroupHS_GetGroupNames(GDALGroupHS self,char options=0){ ^ extensions/gdal_wrap.cpp:5474:63: error: expected primary-expression before 'char' SWIGINTERN char GDALGroupHS_GetGroupNames(GDALGroupHS self,char options=0){ ^ extensions/gdal_wrap.cpp:5474:79: error: expression list treated as compound expression in initializer [-fpermissive] SWIGINTERN char GDALGroupHS_GetGroupNames(GDALGroupHS self,char options=0){ ^ extensions/gdal_wrap.cpp:5474:80: error: expected ',' or ';' before '{' token SWIGINTERN char GDALGroupHS_GetGroupNames(GDALGroupHS *self,char *options=0){ ^ extensions/gdal_wrap.cpp:5477:12: error: 'GDALGroupHS' does not name a type SWIGINTERN GDALGroupHS GDALGroupHS_OpenGroup(GDALGroupHS self,char const name,char options=0){ ^ extensions/gdal_wrap.cpp:5480:12: error: 'GDALGroupHS' does not name a type SWIGINTERN GDALGroupHS GDALGroupHS_OpenGroupFromFullname(GDALGroupHS self,char const *name,char options=0){ ^ extensions/gdal_wrap.cpp:5483:43: error: variable or field 'GDALGroupHS_GetDimensions' declared void SWIGINTERN void GDALGroupHS_GetDimensions(GDALGroupHS self,GDALDimensionHS pdims,size_t *pnCount,char options=0){ ^ extensions/gdal_wrap.cpp:5483:43: error: 'GDALGroupHS' was not declared in this scope extensions/gdal_wrap.cpp:5483:56: error: 'self' was not declared in this scope SWIGINTERN void GDALGroupHS_GetDimensions(GDALGroupHS self,GDALDimensionHS pdims,size_t *pnCount,char options=0){ ^ extensions/gdal_wrap.cpp:5483:61: error: 'GDALDimensionHS' was not declared in this scope SWIGINTERN void GDALGroupHS_GetDimensions(GDALGroupHS self,GDALDimensionHS pdims,size_t *pnCount,char options=0){ ^ extensions/gdal_wrap.cpp:5483:80: error: 'pdims' was not declared in this scope SWIGINTERN void GDALGroupHS_GetDimensions(GDALGroupHS self,GDALDimensionHS pdims,size_t *pnCount,char options=0){ ^ extensions/gdal_wrap.cpp:5483:93: error: expected primary-expression before '' token SWIGINTERN void GDALGroupHS_GetDimensions(GDALGroupHS self,GDALDimensionHS **pdims,size_t pnCount,char options=0){ ^ extensions/gdal_wrap.cpp:5483:94: error: 'pnCount' was not declared in this scope SWIGINTERN void GDALGroupHS_GetDimensions(GDALGroupHS *self,GDALDimensionHS pdims,size_t pnCount,char options=0){ ^ extensions/gdal_wrap.cpp:5483:102: error: expected primary-expression before 'char' SWIGINTERN void GDALGroupHS_GetDimensions(GDALGroupHS *self,GDALDimensionHS pdims,size_t pnCount,char options=0){ ^ extensions/gdal_wrap.cpp:5486:12: error: 'GDALAttributeHS' does not name a type SWIGINTERN GDALAttributeHS GDALGroupHS_GetAttribute(GDALGroupHS self,char const name){ ^ extensions/gdal_wrap.cpp:5489:43: error: variable or field 'GDALGroupHS_GetAttributes' declared void SWIGINTERN void GDALGroupHS_GetAttributes(GDALGroupHS self,GDALAttributeHS pattrs,size_t pnCount,char options=0){ ^ extensions/gdal_wrap.cpp:5489:43: error: 'GDALGroupHS' was not declared in this scope extensions/gdal_wrap.cpp:5489:56: error: 'self' was not declared in this scope SWIGINTERN void GDALGroupHS_GetAttributes(GDALGroupHS *self,GDALAttributeHS pattrs,size_t pnCount,char options=0){ ^ extensions/gdal_wrap.cpp:5489:61: error: 'GDALAttributeHS' was not declared in this scope SWIGINTERN void GDALGroupHS_GetAttributes(GDALGroupHS *self,GDALAttributeHS pattrs,size_t pnCount,char options=0){ ^ extensions/gdal_wrap.cpp:5489:80: error: 'pattrs' was not declared in this scope SWIGINTERN void GDALGroupHS_GetAttributes(GDALGroupHS *self,GDALAttributeHS pattrs,size_t pnCount,char options=0){ ^ extensions/gdal_wrap.cpp:5489:94: error: expected primary-expression before '' token SWIGINTERN void GDALGroupHS_GetAttributes(GDALGroupHS self,GDALAttributeHS pattrs,size_t pnCount,char options=0){ ^ extensions/gdal_wrap.cpp:5489:95: error: 'pnCount' was not declared in this scope SWIGINTERN void GDALGroupHS_GetAttributes(GDALGroupHS *self,GDALAttributeHS pattrs,size_t pnCount,char options=0){ ^ extensions/gdal_wrap.cpp:5489:103: error: expected primary-expression before 'char' SWIGINTERN void GDALGroupHS_GetAttributes(GDALGroupHS *self,GDALAttributeHS pattrs,size_t pnCount,char options=0){ ^ extensions/gdal_wrap.cpp:5492:49: error: 'GDALGroupHS' was not declared in this scope SWIGINTERN char GDALGroupHS_GetStructuralInfo(GDALGroupHS *self){ ^ extensions/gdal_wrap.cpp:5492:62: error: 'self' was not declared in this scope SWIGINTERN char *GDALGroupHS_GetStructuralInfo(GDALGroupHS self){ ^ extensions/gdal_wrap.cpp:5492:67: error: expected ',' or ';' before '{' token SWIGINTERN char GDALGroupHS_GetStructuralInfo(GDALGroupHS self){ ^ extensions/gdal_wrap.cpp:5495:12: error: 'GDALGroupHS' does not name a type SWIGINTERN GDALGroupHS GDALGroupHS_CreateGroup(GDALGroupHS self,char const name,char options=0){ ^ extensions/gdal_wrap.cpp:5498:12: error: 'GDALDimensionHS' does not name a type SWIGINTERN GDALDimensionHS GDALGroupHS_CreateDimension(GDALGroupHS self,char const name,char const type,char const *direction,unsigned long long size,char *options=0){ ^ extensions/gdal_wrap.cpp:5501:12: error: 'GDALMDArrayHS' does not name a type SWIGINTERN GDALMDArrayHS GDALGroupHS_CreateMDArray(GDALGroupHS self,char const name,int nDimensions,GDALDimensionHS dimensions,GDALExtendedDataTypeHS *data_type,char options=0){ ^ extensions/gdal_wrap.cpp:5505:12: error: 'GDALAttributeHS' does not name a type SWIGINTERN GDALAttributeHS GDALGroupHS_CreateAttribute(GDALGroupHS self,char const name,int nDimensions,GUIntBig dimensions,GDALExtendedDataTypeHS *data_type,char options=0){ ^ extensions/gdal_wrap.cpp:5526:34: error: 'GDALExtendedDataTypeHS' was not declared in this scope static bool CheckNumericDataType(GDALExtendedDataTypeHS dt) ^ extensions/gdal_wrap.cpp:5526:58: error: 'dt' was not declared in this scope static bool CheckNumericDataType(GDALExtendedDataTypeHS dt) ^ extensions/gdal_wrap.cpp:5527:1: error: expected ',' or ';' before '{' token { ^ extensions/gdal_wrap.cpp:3407:5: warning: 'int GetUseExceptions()' defined but not used [-Wunused-function] int GetUseExceptions() { ^ extensions/gdal_wrap.cpp:3413:6: warning: 'void UseExceptions()' defined but not used [-Wunused-function] void UseExceptions() { ^ extensions/gdal_wrap.cpp:3430:6: warning: 'void DontUseExceptions()' defined but not used [-Wunused-function] void DontUseExceptions() { ^ extensions/gdal_wrap.cpp:3481:13: warning: 'void ClearErrorState()' defined but not used [-Wunused-function] static void ClearErrorState() ^ extensions/gdal_wrap.cpp:4181:15: warning: 'char CSLFromPySequence(PyObject, int)' defined but not used [-Wunused-function] static char *CSLFromPySequence( PyObject pySeq, int pbErr ) ^ extensions/gdal_wrap.cpp:4599:1: warning: 'PyObject CreateTupleFromDoubleArray(const double, size_t)' defined but not used [-Wunused-function] CreateTupleFromDoubleArray( const double first, size_t size ) { ^ extensions/gdal_wrap.cpp:4943:1: warning: 'int CreateCIntListFromSequence(PyObject, int)' defined but not used [-Wunused-function] CreateCIntListFromSequence( PyObject pySeq, int pnSize ) { ^ extensions/gdal_wrap.cpp:5252:1: warning: 'const char OGRErrMessages(int)' defined but not used [-Wunused-function] OGRErrMessages( int rc ) { ^ extensions/gdal_wrap.cpp:5526:13: warning: 'CheckNumericDataType' defined but not used [-Wunused-variable] static bool CheckNumericDataType(GDALExtendedDataTypeHS dt) ^ building 'osgeo._gdal_array' extension gcc -pthread -B /home/ec2-user/anaconda3/envs/py37/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I../../port -I../../gcore -I../../alg -I../../ogr/ -I../../ogr/ogrsf_frmts -I../../gnm -I../../apps -I/home/ec2-user/anaconda3/envs/py37/include/python3.7m -I/home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/numpy/core/include -I/home/ec2-user/anaconda3/envs/py37/include -c extensions/gdal_array_wrap.cpp -o build/temp.linux-x86_64-3.7/extensions/gdal_array_wrap.o -std=c++11 -I/home/ec2-user/anaconda3/envs/py37/include cc1plus: warning: command line option '-Wstrict-prototypes' is valid for C/ObjC but not for C++ extensions/osr_wrap.cpp: In function 'int OSRSpatialReferenceShadow_IsDerivedGeographic(OSRSpatialReferenceShadow)': extensions/osr_wrap.cpp:3753:39: error: 'OSRIsDerivedGeographic' was not declared in this scope return OSRIsDerivedGeographic(self); ^ extensions/osr_wrap.cpp: In function 'int OSRSpatialReferenceShadow_GetAxesCount(OSRSpatialReferenceShadow)': extensions/osr_wrap.cpp:3960:32: error: 'OSRGetAxesCount' was not declared in this scope return OSRGetAxesCount(self); ^ extensions/osr_wrap.cpp: In function 'OGRErr OSRSpatialReferenceShadow_SetDataAxisToSRSAxisMapping(OSRSpatialReferenceShadow, int, int)': extensions/osr_wrap.cpp:4008:61: error: 'OSRSetDataAxisToSRSAxisMapping' was not declared in this scope return OSRSetDataAxisToSRSAxisMapping(self, nList, pList); ^ extensions/osr_wrap.cpp: In function 'OGRErr OSRSpatialReferenceShadow_SetVerticalPerspective(OSRSpatialReferenceShadow, double, double, double, double, double, double)': extensions/osr_wrap.cpp:4217:81: error: 'OSRSetVerticalPerspective' was not declared in this scope topoOriginLat, topoOriginLon, topoOriginHeight, viewPointHeight, fe, fn ); ^ extensions/osr_wrap.cpp: In function 'OGRErr OSRSpatialReferenceShadow_AddGuessedTOWGS84(OSRSpatialReferenceShadow)': extensions/osr_wrap.cpp:4259:39: error: 'OSRAddGuessedTOWGS84' was not declared in this scope return OSRAddGuessedTOWGS84( self ); ^ extensions/osr_wrap.cpp: In function 'OGRErr OSRSpatialReferenceShadow_ExportToPROJJSON(OSRSpatialReferenceShadow, char, char)': extensions/osr_wrap.cpp:4324:55: error: 'OSRExportToPROJJSON' was not declared in this scope return OSRExportToPROJJSON( self, argout, options ); ^ extensions/osr_wrap.cpp: In function 'OGRErr OSRSpatialReferenceShadow_PromoteTo3D(OSRSpatialReferenceShadow, const char)': extensions/osr_wrap.cpp:4363:37: error: 'OSRPromoteTo3D' was not declared in this scope return OSRPromoteTo3D(self, name); ^ extensions/osr_wrap.cpp: In function 'OGRErr OSRSpatialReferenceShadow_DemoteTo2D(OSRSpatialReferenceShadow, const char)': extensions/osr_wrap.cpp:4366:36: error: 'OSRDemoteTo2D' was not declared in this scope return OSRDemoteTo2D(self, name); ^ extensions/osr_wrap.cpp: In function 'bool OGRCoordinateTransformationOptions_SetDesiredAccuracy(OGRCoordinateTransformationOptions, double)': extensions/osr_wrap.cpp:4383:79: error: 'OCTCoordinateTransformationOptionsSetDesiredAccuracy' was not declared in this scope return OCTCoordinateTransformationOptionsSetDesiredAccuracy(self, accuracy); ^ extensions/osr_wrap.cpp: In function 'bool OGRCoordinateTransformationOptions_SetBallparkAllowed(OGRCoordinateTransformationOptions, bool)': extensions/osr_wrap.cpp:4400:84: error: 'OCTCoordinateTransformationOptionsSetBallparkAllowed' was not declared in this scope return OCTCoordinateTransformationOptionsSetBallparkAllowed(self, allowBallpark); ^ extensions/osr_wrap.cpp: In function 'void OSRCoordinateTransformationShadow_TransformPointWithErrorCode(OSRCoordinateTransformationShadow, double, int*, double, double, double, double)': extensions/osr_wrap.cpp:4446:102: error: 'OCTTransform4DWithErrorCodes' was not declared in this scope OCTTransform4DWithErrorCodes( self, 1, &argout[0], &argout[1], &argout[2], &argout[3], errorCode ); ^ extensions/osr_wrap.cpp: In function 'char* GetPROJSearchPaths()': extensions/osr_wrap.cpp:4654:34: error: 'OSRGetPROJSearchPaths' was not declared in this scope return OSRGetPROJSearchPaths(); ^ extensions/osr_wrap.cpp: In function 'void SetPROJAuxDbPath(const char)': extensions/osr_wrap.cpp:4683:35: error: 'OSRSetPROJAuxDbPaths' was not declared in this scope OSRSetPROJAuxDbPaths(apszPaths); ^ extensions/osr_wrap.cpp: In function 'void SetPROJAuxDbPaths(char)': extensions/osr_wrap.cpp:4689:31: error: 'OSRSetPROJAuxDbPaths' was not declared in this scope OSRSetPROJAuxDbPaths(paths); ^ extensions/osr_wrap.cpp: In function 'char GetPROJAuxDbPaths()': extensions/osr_wrap.cpp:4695:33: error: 'OSRGetPROJAuxDbPaths' was not declared in this scope return OSRGetPROJAuxDbPaths(); ^ extensions/ogr_wrap.cpp: In function 'OGRErr OGRDataSourceShadow_AbortSQL(OGRDataSourceShadow)': extensions/ogr_wrap.cpp:4052:58: error: 'GDALDatasetAbortSQL' was not declared in this scope return GDALDatasetAbortSQL((OGRDataSourceShadow)self); ^ extensions/ogr_wrap.cpp: In function 'int ValidateOGRFieldSubType(OGRFieldSubType)': extensions/ogr_wrap.cpp:4889:18: error: 'OFSTUUID' was not declared in this scope case OFSTUUID: ^ extensions/ogr_wrap.cpp: In function 'const char OGRFieldDefnShadow_GetAlternativeName(OGRFieldDefnShadow)': extensions/ogr_wrap.cpp:4916:46: error: 'OGR_Fld_GetAlternativeNameRef' was not declared in this scope return OGR_Fld_GetAlternativeNameRef(self); ^ extensions/ogr_wrap.cpp: In function 'const char OGRFieldDefnShadow_GetAlternativeNameRef(OGRFieldDefnShadow)': extensions/ogr_wrap.cpp:4919:46: error: 'OGR_Fld_GetAlternativeNameRef' was not declared in this scope return OGR_Fld_GetAlternativeNameRef(self); ^ extensions/ogr_wrap.cpp: In function 'void OGRFieldDefnShadow_SetAlternativeName(OGRFieldDefnShadow, const char)': extensions/ogr_wrap.cpp:4922:53: error: 'OGR_Fld_SetAlternativeName' was not declared in this scope OGR_Fld_SetAlternativeName(self, alternativeName); ^ extensions/ogr_wrap.cpp: In function 'int OGRFieldDefnShadow_IsUnique(OGRFieldDefnShadow)': extensions/ogr_wrap.cpp:4975:35: error: 'OGR_Fld_IsUnique' was not declared in this scope return OGR_Fld_IsUnique( self ); ^ extensions/ogr_wrap.cpp: In function 'void OGRFieldDefnShadow_SetUnique(OGRFieldDefnShadow, int)': extensions/ogr_wrap.cpp:4978:38: error: 'OGR_Fld_SetUnique' was not declared in this scope OGR_Fld_SetUnique( self, bUnique ); ^ extensions/ogr_wrap.cpp: In function 'const char OGRFieldDefnShadow_GetDomainName(OGRFieldDefnShadow)': extensions/ogr_wrap.cpp:4990:38: error: 'OGR_Fld_GetDomainName' was not declared in this scope return OGR_Fld_GetDomainName(self); ^ extensions/ogr_wrap.cpp: In function 'void OGRFieldDefnShadow_SetDomainName(OGRFieldDefnShadow, const char)': extensions/ogr_wrap.cpp:4993:39: error: 'OGR_Fld_SetDomainName' was not declared in this scope OGR_Fld_SetDomainName( self, name ); ^ extensions/ogr_wrap.cpp: In function 'OGRGeometryShadow CreateGeometryFromEsriJson(const char)': extensions/ogr_wrap.cpp:5203:96: error: 'OGR_G_CreateGeometryFromEsriJson' was not declared in this scope OGRGeometryShadow geom = (OGRGeometryShadow)OGR_G_CreateGeometryFromEsriJson(input_string); ^ extensions/ogr_wrap.cpp: In function 'OGRErr OGRGeometryShadow_ExportToWkb(OGRGeometryShadow, size_t, char, OGRwkbByteOrder)': extensions/ogr_wrap.cpp:5316:35: error: 'OGR_G_WkbSizeEx' was not declared in this scope nLen = OGR_G_WkbSizeEx( self ); ^ extensions/ogr_wrap.cpp: In function 'OGRErr OGRGeometryShadow_ExportToIsoWkb(OGRGeometryShadow, size_t*, char, OGRwkbByteOrder)': extensions/ogr_wrap.cpp:5323:35: error: 'OGR_G_WkbSizeEx' was not declared in this scope nLen = OGR_G_WkbSizeEx( self ); ^ extensions/ogr_wrap.cpp: In function 'OGRGeometryShadow OGRGeometryShadow_Normalize(OGRGeometryShadow)': extensions/ogr_wrap.cpp:5485:53: error: 'OGR_G_Normalize' was not declared in this scope return (OGRGeometryShadow) OGR_G_Normalize(self); ^ extensions/ogr_wrap.cpp: In function 'OGRGeometryShadow OGRGeometryShadow_RemoveLowerDimensionSubGeoms(OGRGeometryShadow)': extensions/ogr_wrap.cpp:5488:72: error: 'OGR_G_RemoveLowerDimensionSubGeoms' was not declared in this scope return (OGRGeometryShadow) OGR_G_RemoveLowerDimensionSubGeoms(self); ^ extensions/ogr_wrap.cpp: In function 'size_t OGRGeometryShadow_WkbSize(OGRGeometryShadow)': extensions/ogr_wrap.cpp:5601:32: error: 'OGR_G_WkbSizeEx' was not declared in this scope return OGR_G_WkbSizeEx(self); ^ extensions/ogr_wrap.cpp: In function 'OGRGeometryShadow OGRGeometryShadow_Transform__SWIG_1(OGRGeometryShadow, OGRGeomTransformerShadow)': extensions/ogr_wrap.cpp:5677:79: error: 'OGR_GeomTransformer_Transform' was not declared in this scope return (OGRGeometryShadow)OGR_GeomTransformer_Transform(transformer, self); ^ extensions/ogr_wrap.cpp: In function 'OGRPreparedGeometryShadow OGRGeometryShadow_CreatePreparedGeometry(OGRGeometryShadow)': extensions/ogr_wrap.cpp:5680:70: error: 'OGRCreatePreparedGeometry' was not declared in this scope return (OGRPreparedGeometryShadow)OGRCreatePreparedGeometry(self); ^ extensions/ogr_wrap.cpp: In function 'void delete_OGRPreparedGeometryShadow(OGRPreparedGeometryShadow)': extensions/ogr_wrap.cpp:5683:38: error: 'OGRDestroyPreparedGeometry' was not declared in this scope OGRDestroyPreparedGeometry( self ); ^ extensions/ogr_wrap.cpp: In function 'bool OGRPreparedGeometryShadow_Intersects(OGRPreparedGeometryShadow, const OGRGeometryShadow)': extensions/ogr_wrap.cpp:5686:71: error: 'OGRPreparedGeometryIntersects' was not declared in this scope return OGRPreparedGeometryIntersects(self, (OGRGeometryH)otherGeom); ^ extensions/ogr_wrap.cpp: In function 'bool OGRPreparedGeometryShadow_Contains(OGRPreparedGeometryShadow, const OGRGeometryShadow)': extensions/ogr_wrap.cpp:5689:69: error: 'OGRPreparedGeometryContains' was not declared in this scope return OGRPreparedGeometryContains(self, (OGRGeometryH)otherGeom); ^ extensions/ogr_wrap.cpp: In function 'OGRGeomTransformerShadow new_OGRGeomTransformerShadow(OSRCoordinateTransformationShadow, char)': extensions/ogr_wrap.cpp:5692:50: error: 'OGR_GeomTransformer_Create' was not declared in this scope return OGR_GeomTransformer_Create(ct, options); ^ extensions/ogr_wrap.cpp: In function 'void delete_OGRGeomTransformerShadow(OGRGeomTransformerShadow)': extensions/ogr_wrap.cpp:5695:39: error: 'OGR_GeomTransformer_Destroy' was not declared in this scope OGR_GeomTransformer_Destroy( self ); ^ extensions/ogr_wrap.cpp: In function 'OGRGeometryShadow OGRGeomTransformerShadow_Transform(OGRGeomTransformerShadow, OGRGeometryShadow)': extensions/ogr_wrap.cpp:5698:76: error: 'OGR_GeomTransformer_Transform' was not declared in this scope return (OGRGeometryShadow)OGR_GeomTransformer_Transform(self, src_geom); ^ extensions/ogr_wrap.cpp: In function 'void delete_OGRFieldDomainShadow(OGRFieldDomainShadow)': extensions/ogr_wrap.cpp:5701:31: error: 'OGR_FldDomain_Destroy' was not declared in this scope OGR_FldDomain_Destroy(self); ^ extensions/ogr_wrap.cpp: In function 'const char OGRFieldDomainShadow_GetName(OGRFieldDomainShadow)': extensions/ogr_wrap.cpp:5704:38: error: 'OGR_FldDomain_GetName' was not declared in this scope return OGR_FldDomain_GetName(self); ^ extensions/ogr_wrap.cpp: In function 'const char OGRFieldDomainShadow_GetDescription(OGRFieldDomainShadow)': extensions/ogr_wrap.cpp:5707:45: error: 'OGR_FldDomain_GetDescription' was not declared in this scope return OGR_FldDomain_GetDescription(self); ^ extensions/ogr_wrap.cpp: In function 'OGRFieldType OGRFieldDomainShadow_GetFieldType(OGRFieldDomainShadow)': extensions/ogr_wrap.cpp:5710:43: error: 'OGR_FldDomain_GetFieldType' was not declared in this scope return OGR_FldDomain_GetFieldType(self); ^ extensions/ogr_wrap.cpp: In function 'OGRFieldSubType OGRFieldDomainShadow_GetFieldSubType(OGRFieldDomainShadow)': extensions/ogr_wrap.cpp:5713:46: error: 'OGR_FldDomain_GetFieldSubType' was not declared in this scope return OGR_FldDomain_GetFieldSubType(self); ^ extensions/ogr_wrap.cpp: At global scope: extensions/ogr_wrap.cpp:5715:12: error: 'OGRFieldDomainType' does not name a type SWIGINTERN OGRFieldDomainType OGRFieldDomainShadow_GetDomainType(OGRFieldDomainShadow self){ ^ extensions/ogr_wrap.cpp:5718:12: error: 'OGRFieldDomainSplitPolicy' does not name a type SWIGINTERN OGRFieldDomainSplitPolicy OGRFieldDomainShadow_GetSplitPolicy(OGRFieldDomainShadow self){ ^ extensions/ogr_wrap.cpp:5721:80: error: 'OGRFieldDomainSplitPolicy' has not been declared SWIGINTERN void OGRFieldDomainShadow_SetSplitPolicy(OGRFieldDomainShadow self,OGRFieldDomainSplitPolicy policy){ ^ extensions/ogr_wrap.cpp: In function 'void OGRFieldDomainShadow_SetSplitPolicy(OGRFieldDomainShadow, int)': extensions/ogr_wrap.cpp:5722:46: error: 'OGR_FldDomain_SetSplitPolicy' was not declared in this scope OGR_FldDomain_SetSplitPolicy(self, policy); ^ extensions/ogr_wrap.cpp: At global scope: extensions/ogr_wrap.cpp:5724:12: error: 'OGRFieldDomainMergePolicy' does not name a type SWIGINTERN OGRFieldDomainMergePolicy OGRFieldDomainShadow_GetMergePolicy(OGRFieldDomainShadow self){ ^ extensions/ogr_wrap.cpp:5727:80: error: 'OGRFieldDomainMergePolicy' has not been declared SWIGINTERN void OGRFieldDomainShadow_SetMergePolicy(OGRFieldDomainShadow self,OGRFieldDomainMergePolicy policy){ ^ extensions/ogr_wrap.cpp: In function 'void OGRFieldDomainShadow_SetMergePolicy(OGRFieldDomainShadow, int)': extensions/ogr_wrap.cpp:5728:46: error: 'OGR_FldDomain_SetMergePolicy' was not declared in this scope OGR_FldDomain_SetMergePolicy(self, policy); ^ extensions/ogr_wrap.cpp: At global scope: extensions/ogr_wrap.cpp:5730:12: error: 'OGRCodedValue' does not name a type SWIGINTERN OGRCodedValue const OGRFieldDomainShadow_GetEnumeration(OGRFieldDomainShadow self){ ^ extensions/ogr_wrap.cpp: In function 'double OGRFieldDomainShadow_GetMinAsDouble(OGRFieldDomainShadow)': extensions/ogr_wrap.cpp:5734:67: error: 'OGR_RangeFldDomain_GetMin' was not declared in this scope const OGRField psVal = OGR_RangeFldDomain_GetMin(self, NULL); ^ extensions/ogr_wrap.cpp:5737:65: error: 'OGR_FldDomain_GetFieldType' was not declared in this scope const OGRFieldType eType = OGR_FldDomain_GetFieldType(self); ^ extensions/ogr_wrap.cpp: In function 'bool OGRFieldDomainShadow_IsMinInclusive(OGRFieldDomainShadow)': extensions/ogr_wrap.cpp:5748:57: error: 'OGR_RangeFldDomain_GetMin' was not declared in this scope (void)OGR_RangeFldDomain_GetMin(self, &isInclusive); ^ extensions/ogr_wrap.cpp: In function 'double OGRFieldDomainShadow_GetMaxAsDouble(OGRFieldDomainShadow)': extensions/ogr_wrap.cpp:5752:67: error: 'OGR_RangeFldDomain_GetMax' was not declared in this scope const OGRField psVal = OGR_RangeFldDomain_GetMax(self, NULL); ^ extensions/ogr_wrap.cpp:5755:65: error: 'OGR_FldDomain_GetFieldType' was not declared in this scope const OGRFieldType eType = OGR_FldDomain_GetFieldType(self); ^ extensions/ogr_wrap.cpp: In function 'bool OGRFieldDomainShadow_IsMaxInclusive(OGRFieldDomainShadow)': extensions/ogr_wrap.cpp:5766:57: error: 'OGR_RangeFldDomain_GetMax' was not declared in this scope (void)OGR_RangeFldDomain_GetMax(self, &isInclusive); ^ extensions/ogr_wrap.cpp: In function 'const char OGRFieldDomainShadow_GetGlob(OGRFieldDomainShadow)': extensions/ogr_wrap.cpp:5770:44: error: 'OGR_GlobFldDomain_GetGlob' was not declared in this scope return OGR_GlobFldDomain_GetGlob(self); ^ extensions/ogr_wrap.cpp: At global scope: extensions/ogr_wrap.cpp:5778:53: error: 'OGRCodedValue' does not name a type const OGRCodedValue enumeration) { ^ extensions/ogr_wrap.cpp: In function 'OGRFieldDomainShadow CreateCodedFieldDomain(const char, const char, OGRFieldType, OGRFieldSubType, const int)': extensions/ogr_wrap.cpp:5783:73: error: 'OGR_CodedFldDomain_Create' was not declared in this scope enumeration ); ^ extensions/ogr_wrap.cpp: In function 'OGRFieldDomainShadow CreateRangeFieldDomain(const char, const char, OGRFieldType, OGRFieldSubType, double, bool, double, double)': extensions/ogr_wrap.cpp:5821:76: error: 'OGR_RangeFldDomain_Create' was not declared in this scope maxIsInclusive ); ^ extensions/ogr_wrap.cpp: In function 'OGRFieldDomainShadow CreateGlobFieldDomain(const char, const char, OGRFieldType, OGRFieldSubType, const char)': extensions/ogr_wrap.cpp:5849:65: error: 'OGR_GlobFldDomain_Create' was not declared in this scope glob ); ^ extensions/ogr_wrap.cpp: In function 'PyObject _wrap_FieldDomain_GetDomainType(PyObject, PyObject)': extensions/ogr_wrap.cpp:28393:3: error: 'OGRFieldDomainType' was not declared in this scope OGRFieldDomainType result; ^ extensions/ogr_wrap.cpp:28407:7: error: 'result' was not declared in this scope result = (OGRFieldDomainType)OGRFieldDomainShadow_GetDomainType(arg1); ^ extensions/ogr_wrap.cpp:28419:48: error: 'result' was not declared in this scope resultobj = SWIG_From_int(static_cast< int >(result)); ^ extensions/ogr_wrap.cpp: In function 'PyObject _wrap_FieldDomain_GetSplitPolicy(PyObject, PyObject)': extensions/ogr_wrap.cpp:28433:3: error: 'OGRFieldDomainSplitPolicy' was not declared in this scope OGRFieldDomainSplitPolicy result; ^ extensions/ogr_wrap.cpp:28447:7: error: 'result' was not declared in this scope result = (OGRFieldDomainSplitPolicy)OGRFieldDomainShadow_GetSplitPolicy(arg1); ^ extensions/ogr_wrap.cpp:28459:48: error: 'result' was not declared in this scope resultobj = SWIG_From_int(static_cast< int >(result)); ^ extensions/ogr_wrap.cpp: In function 'PyObject _wrap_FieldDomain_SetSplitPolicy(PyObject, PyObject)': extensions/ogr_wrap.cpp:28470:3: error: 'OGRFieldDomainSplitPolicy' was not declared in this scope OGRFieldDomainSplitPolicy arg2 ; ^ extensions/ogr_wrap.cpp:28488:3: error: 'arg2' was not declared in this scope arg2 = static_cast< OGRFieldDomainSplitPolicy >(val2); ^ extensions/ogr_wrap.cpp:28488:23: error: 'OGRFieldDomainSplitPolicy' does not name a type arg2 = static_cast< OGRFieldDomainSplitPolicy >(val2); ^ extensions/ogr_wrap.cpp: In function 'PyObject _wrap_FieldDomain_GetMergePolicy(PyObject, PyObject)': extensions/ogr_wrap.cpp:28521:3: error: 'OGRFieldDomainMergePolicy' was not declared in this scope OGRFieldDomainMergePolicy result; ^ extensions/ogr_wrap.cpp:28535:7: error: 'result' was not declared in this scope result = (OGRFieldDomainMergePolicy)OGRFieldDomainShadow_GetMergePolicy(arg1); ^ extensions/ogr_wrap.cpp:28547:48: error: 'result' was not declared in this scope resultobj = SWIG_From_int(static_cast< int >(result)); ^ extensions/ogr_wrap.cpp: In function 'PyObject _wrap_FieldDomain_SetMergePolicy(PyObject, PyObject)': extensions/ogr_wrap.cpp:28558:3: error: 'OGRFieldDomainMergePolicy' was not declared in this scope OGRFieldDomainMergePolicy arg2 ; ^ extensions/ogr_wrap.cpp:28576:3: error: 'arg2' was not declared in this scope arg2 = static_cast< OGRFieldDomainMergePolicy >(val2); ^ extensions/ogr_wrap.cpp:28576:23: error: 'OGRFieldDomainMergePolicy' does not name a type arg2 = static_cast< OGRFieldDomainMergePolicy >(val2); ^ extensions/ogr_wrap.cpp: In function 'PyObject _wrap_FieldDomain_GetEnumeration(PyObject, PyObject)': extensions/ogr_wrap.cpp:28609:3: error: 'OGRCodedValue' was not declared in this scope OGRCodedValue result = 0 ; ^ extensions/ogr_wrap.cpp:28609:18: error: 'result' was not declared in this scope OGRCodedValue result = 0 ; ^ extensions/ogr_wrap.cpp:28623:32: error: expected primary-expression before ')' token result = (OGRCodedValue )OGRFieldDomainShadow_GetEnumeration(arg1); ^ extensions/ogr_wrap.cpp: In function 'PyObject _wrap_CreateCodedFieldDomain(PyObject, PyObject)': extensions/ogr_wrap.cpp:28878:3: error: 'OGRCodedValue' was not declared in this scope OGRCodedValue arg5 = (OGRCodedValue ) 0 ; ^ extensions/ogr_wrap.cpp:28878:18: error: 'arg5' was not declared in this scope OGRCodedValue arg5 = (OGRCodedValue ) 0 ; ^ extensions/ogr_wrap.cpp:28878:41: error: expected primary-expression before ')' token OGRCodedValue arg5 = (OGRCodedValue ) 0 ; ^ extensions/ogr_wrap.cpp:28925:27: error: expected primary-expression before ')' token arg5 = (OGRCodedValue)CPLCalloc(size+1, sizeof(OGRCodedValue) ); ^ extensions/ogr_wrap.cpp:29008:126: error: expected ')' before 'const' result = (OGRFieldDomainShadow )CreateCodedFieldDomain((char const )arg1,(char const )arg2,arg3,arg4,(OGRCodedValue const )arg5); ^ extensions/ogr_wrap.cpp:29008:139: error: expected ')' before ';' token result = (OGRFieldDomainShadow )CreateCodedFieldDomain((char const )arg1,(char const )arg2,arg3,arg4,(OGRCodedValue const )arg5); ^ extensions/gdal_array_wrap.cpp:3994:21: error: 'GDALGroup' was not declared in this scope std::shared_ptr GetRootGroup() const override { return poMEMDS->GetRootGroup(); } ^ extensions/gdal_array_wrap.cpp:3994:30: error: template argument 1 is invalid std::shared_ptr GetRootGroup() const override { return poMEMDS->GetRootGroup(); } ^ extensions/gdal_array_wrap.cpp:3994:32: error: 'int NUMPYMultiDimensionalDataset::GetRootGroup() const' marked 'override', but does not override std::shared_ptr GetRootGroup() const override { return poMEMDS->GetRootGroup(); } ^ extensions/gdal_array_wrap.cpp: In member function 'int NUMPYMultiDimensionalDataset::GetRootGroup() const': extensions/gdal_array_wrap.cpp:3994:80: error: 'class GDALDataset' has no member named 'GetRootGroup' std::shared_ptr GetRootGroup() const override { return poMEMDS->GetRootGroup(); } ^ extensions/gdal_array_wrap.cpp: In static member function 'static GDALDataset NUMPYMultiDimensionalDataset::Open(PyArrayObject)': extensions/gdal_array_wrap.cpp:4038:33: error: 'class GDALDriver' has no member named 'CreateMultiDimensional' auto poMEMDS = poMemDriver->CreateMultiDimensional("", nullptr, nullptr); ^ extensions/gdal_array_wrap.cpp:4042:33: error: 'GDALDimension' was not declared in this scope std::vector<std::shared_ptr> apoDims; ^ extensions/gdal_array_wrap.cpp:4042:33: error: template argument 1 is invalid extensions/gdal_array_wrap.cpp:4042:46: error: template argument 1 is invalid std::vector<std::shared_ptr> apoDims; ^ extensions/gdal_array_wrap.cpp:4042:46: error: template argument 2 is invalid extensions/gdal_array_wrap.cpp:4052:17: error: request for member 'push_back' in 'apoDims', which is of non-class type 'int' apoDims.push_back(poDim); ^ extensions/gdal_array_wrap.cpp:4068:39: error: 'GDALExtendedDataType' has not been declared GDALExtendedDataType::Create(eType), ^ extensions/gdal_array_wrap.cpp:4072:16: error: type '' argument given to 'delete', expected pointer delete poMEMDS; ^ extensions/gdal_array_wrap.cpp: At global scope: extensions/gdal_array_wrap.cpp:4522:34: error: 'GDALExtendedDataTypeHS' was not declared in this scope static bool CheckNumericDataType(GDALExtendedDataTypeHS dt) ^ extensions/gdal_array_wrap.cpp:4522:58: error: 'dt' was not declared in this scope static bool CheckNumericDataType(GDALExtendedDataTypeHS dt) ^ extensions/gdal_array_wrap.cpp:4523:1: error: expected ',' or ';' before '{' token { ^ extensions/gdal_array_wrap.cpp:3514:13: warning: 'void _StoreLastException()' defined but not used [-Wunused-function] static void _StoreLastException() ^ In file included from /home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:21:0, from /home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, from extensions/gdal_array_wrap.cpp:3539: /home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1464:1: warning: 'int _import_array()' defined but not used [-Wunused-function] _import_array(void) ^ extensions/gdal_array_wrap.cpp:4492:1: warning: 'int CreateCIntListFromSequence(PyObject, int)' defined but not used [-Wunused-function] CreateCIntListFromSequence( PyObject pySeq, int pnSize ) { ^ extensions/gdal_array_wrap.cpp:4522:13: warning: 'CheckNumericDataType' defined but not used [-Wunused-variable] static bool CheckNumericDataType(GDALExtendedDataTypeHS dt) ^ g++ -pthread -shared -B /home/ec2-user/anaconda3/envs/py37/compiler_compat -L/home/ec2-user/anaconda3/envs/py37/lib -Wl,-rpath=/home/ec2-user/anaconda3/envs/py37/lib -Wl,--no-as-needed -Wl,--sysroot=/ build/temp.linux-x86_64-3.7/extensions/gnm_wrap.o -L../../.libs -L../../ -L/home/ec2-user/anaconda3/envs/py37/lib -lgdal -o build/lib.linux-x86_64-3.7/osgeo/_gnm.cpython-37m-x86_64-linux-gnu.so /home/ec2-user/anaconda3/envs/py37/compiler_compat/ld: cannot find crti.o: No such file or directory collect2: error: ld returned 1 exit status error: command 'gcc' failed with exit status 1

Rolling back uninstall of GDAL Moving to /home/ec2-user/anaconda3/envs/py37/bin/epsg_tr.py from /tmp/pip-uninstall-03hjh7qu/epsg_tr.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/esri2wkt.py from /tmp/pip-uninstall-03hjh7qu/esri2wkt.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/gcps2vec.py from /tmp/pip-uninstall-03hjh7qu/gcps2vec.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/gcps2wld.py from /tmp/pip-uninstall-03hjh7qu/gcps2wld.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/gdal2tiles.py from /tmp/pip-uninstall-03hjh7qu/gdal2tiles.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/gdal2xyz.py from /tmp/pip-uninstall-03hjh7qu/gdal2xyz.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/gdal_auth.py from /tmp/pip-uninstall-03hjh7qu/gdal_auth.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/gdal_calc.py from /tmp/pip-uninstall-03hjh7qu/gdal_calc.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/gdal_edit.py from /tmp/pip-uninstall-03hjh7qu/gdal_edit.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/gdal_fillnodata.py from /tmp/pip-uninstall-03hjh7qu/gdal_fillnodata.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/gdal_merge.py from /tmp/pip-uninstall-03hjh7qu/gdal_merge.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/gdal_pansharpen.py from /tmp/pip-uninstall-03hjh7qu/gdal_pansharpen.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/gdal_polygonize.py from /tmp/pip-uninstall-03hjh7qu/gdal_polygonize.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/gdal_proximity.py from /tmp/pip-uninstall-03hjh7qu/gdal_proximity.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/gdal_retile.py from /tmp/pip-uninstall-03hjh7qu/gdal_retile.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/gdal_sieve.py from /tmp/pip-uninstall-03hjh7qu/gdal_sieve.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/gdalchksum.py from /tmp/pip-uninstall-03hjh7qu/gdalchksum.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/gdalcompare.py from /tmp/pip-uninstall-03hjh7qu/gdalcompare.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/gdalident.py from /tmp/pip-uninstall-03hjh7qu/gdalident.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/gdalimport.py from /tmp/pip-uninstall-03hjh7qu/gdalimport.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/gdalmove.py from /tmp/pip-uninstall-03hjh7qu/gdalmove.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/mkgraticule.py from /tmp/pip-uninstall-03hjh7qu/mkgraticule.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/ogrmerge.py from /tmp/pip-uninstall-03hjh7qu/ogrmerge.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/pct2rgb.py from /tmp/pip-uninstall-03hjh7qu/pct2rgb.py Moving to /home/ec2-user/anaconda3/envs/py37/bin/rgb2pct.py from /tmp/pip-uninstall-03hjh7qu/rgb2pct.py Moving to /home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/GDAL-3.0.2-py3.7-linux-x86_64.egg-info from /home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/~DAL-3.0.2-py3.7-linux-x86_64.egg-info Moving to /home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/gdal.py from /tmp/pip-uninstall-ybfak1bk/gdal.py Moving to /home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/gdalconst.py from /tmp/pip-uninstall-ybfak1bk/gdalconst.py Moving to /home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/gdalnumeric.py from /tmp/pip-uninstall-ybfak1bk/gdalnumeric.py Moving to /home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/ogr.py from /tmp/pip-uninstall-ybfak1bk/ogr.py Moving to /home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/osgeo from /home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/~sgeo Moving to /home/ec2-user/anaconda3/envs/py37/lib/python3.7/site-packages/osr.py from /tmp/pip-uninstall-ybfak1bk/osr.py ERROR: Command errored out with exit status 1: /home/ec2-user/anaconda3/envs/py37/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-2wgtjwg8/gdal_5465e3c114f843c8a0d909113819ff34/setup.py'"'"'; file='"'"'/tmp/pip-install-2wgtjwg8/gdal_5465e3c114f843c8a0d909113819ff34/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /tmp/pip-record-uh53hv0g/install-record.txt --single-version-externally-managed --compile --install-headers /home/ec2-user/anaconda3/envs/py37/include/python3.7m/gdal Check the logs for full command output.

Environment information

I am able to successfully instal gdal with conda however when I try to install solaris, I always get the error above

aegonwolf commented 2 years ago

@AWS-Bassem were you able to figure this out? I get your error doing a normal install, and others when using the setup script

AWS-Bassem commented 2 years ago

No. I could not get it to work

From: Oliver @.> Sent: Wednesday, November 17, 2021 8:02 AM To: CosmiQ/solaris @.> Cc: Yacoube, Bassem @.>; Mention @.> Subject: Re: [CosmiQ/solaris] [BUG]: installation always fails (#432)

@AWS-Bassemhttps://github.com/AWS-Bassem were you able to figure this out? I get your error doing a normal install, and others when using the setup script

— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHubhttps://github.com/CosmiQ/solaris/issues/432#issuecomment-971721666, or unsubscribehttps://github.com/notifications/unsubscribe-auth/AO7SJJPD4JWRHOILVUYQKLLUMPGYHANCNFSM5CSFC47Q. Triage notifications on the go with GitHub Mobile for iOShttps://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675 or Androidhttps://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub.

RichardScottOZ commented 2 years ago

Pip and gdal will have problems a lot of the time - maybe try fixing that part with conda first?