This PR turns an existing single analysis plot for the number of RNAP-replisome collisions per gene into a cohort plot that calculates the average counts across multiple cells. I "figured" a cohort plot would be more appropriate for this plot since there is a lot of stochasticity between individual cells in terms of both gene expression levels and the regions of the chromosome traversed by replication forks. Sample plot shown below:
This PR turns an existing single analysis plot for the number of RNAP-replisome collisions per gene into a cohort plot that calculates the average counts across multiple cells. I "figured" a cohort plot would be more appropriate for this plot since there is a lot of stochasticity between individual cells in terms of both gene expression levels and the regions of the chromosome traversed by replication forks. Sample plot shown below: