CovertLab / wcEcoli

Whole Cell Model of E. coli
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Add media options for rRNA variants #1412

Closed ggsun closed 7 months ago

ggsun commented 7 months ago

This PR adds options to use the rRNA variants to run in different media conditions, namely rich media and minimal-to-rich shift conditions. For all of them I simply adopted a system where a nonzero variant index also determines which media conditions the specific rRNA variants would run in. The paper_runs.sh runscript was updated to make use of these new variants.