Convert output of fitter away from cPickle to something readable (JSON?)

CovertLab / wcEcoli

Whole Cell Model of E. coli

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Convert output of fitter away from cPickle to something readable (JSON?) #233

Open prismofeverything opened 6 years ago

prismofeverything commented 6 years ago

Right now the fitter emits five .cPickle files which cannot be inspected or read by any other system besides instantiating python classes. This would ideally be in a structured format like JSON that is system agnostic.

jmason42 commented 6 years ago

I think the deeper issue here is restructuring the sim_data object. If it was flat and composed of basic types (or arrays of basic types), saving and loading would be pretty easy.