Craig44 / SpatialSablefishAssessment

A R package that contains TMB stock assessment models and auxiliary functions. Initially it was built for Sablefish, but could be fit to any stock that exhibits sexual dimorphism, has two fishing fleets and generalized number of spatial regions.
https://craig44.github.io/SpatialSablefishAssessment/
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ADD projection component #2

Closed Craig44 closed 1 year ago

Craig44 commented 1 year ago

Recruitment

Options for projected recruit devs

Fishing mortality

Craig44 commented 1 year ago

Created a function find_fref which will find an F that achieves some user defined global (summed across all regions) percent B0 target. See commit e4ef5e10ddd1ae4069a3b78849cfb782738a62a6.

We will probably be modifying these to allow for more complex conditions to solve for F's in different regions. Although this function will satisfy some overall SSB target, some regions may be at unacceptable levels.