Feature order of genes on complementary strand are confusing

CroBiAd / DAWN

Diversity Among Wheat geNomes (DAWN)

http://crobiad.agwine.adelaide.edu.au/dawn/

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Feature order of genes on complementary strand are confusing #1

Closed jcsanchez2 closed 5 years ago

jcsanchez2 commented 6 years ago

Feature order is shown 5' -> 3' relative to the reference, while the sequence associated with the features are reverse complemented, as expected. In addition, the feature numbering is "backwards" for these features. This will be very confusing for DAWN users.

nathanhaigh commented 6 years ago

Posted an issue to JBrowse directly https://github.com/GMOD/jbrowse/issues/1071

nathanhaigh commented 5 years ago

I submitted a pull request to JBrowse to fix this (https://github.com/GMOD/jbrowse/pull/1114). The fix has been merged into the latest version of JBrowse (v1.15.0) and is now the version underpinning DAWN.