Week 8 Feedback

[schidambaran]

Please submit your assignment for week 8.

README.md file with commands and answers to questions

4.5/5

Exercise	Points Possible	Grade
Command to run chicago in step 1.1	1	1
Answer to question in step 1.2	1	1
List of top 6 promoter-promoter interactions from step 2.2	1	1
List of top 6 promoter-enhancer interactions from step 2.2	1	1
Answer to question in step 2.3	1	0.5

Your convert_washU_to_UCSC.py script from step 2.1

3/3

The output interaction bed file from running convert_washU_to_UCSC.py

1/1

The two UCSC genome browser screen shots of your selected promoter-enhancer interactions

1/1

Total: 9.5/10

Great work! For full credit:

• Step 2.3: What specific genes are these interactions associated with, and does it make sense for them to be interacting with enhancers in GM12878?

[schidambaran]

Your grade has been updated!