Triage for [Project Title] Release [X.X.X]

This is a checklist issue. As we review each repo we should check the following items.

1. Check on file versions (all files below should have a version comment in the first line of the file)

[ ] misc/static/cyverse.css is version 2.0
[ ] misc/static/cyverse.js is version 2.0
[ ] misc/static/detail-expand.css is version 2.0
[ ] misc/static/detail-expand.js is version 2.0
[ ] misc/static/intercom-script-for-learning.js is version 2.0
[ ] misc/static/question-answer.js is version 2.0
[ ] misc/static/jquery.min.js is version 2.0
[ ] misc/cyverse_spinx_conf.py is version 2.0
[ ] conf.py is version 2.0
[ ] cyverse_rst_defined_substitutions.txt is version 2.0
[ ] README.md is version 2.0

2. Check on the following required formatting for all pages

[ ] All .rst pages begin with the following

.. include:: cyverse_rst_defined_substitutions.txt
.. include:: custom_urls.txt

 |CyVerse_logo|_

|Home_Icon|_
`Learning Center Home <http://learning.cyverse.org/>`_

[ ] Documentation contains maintainer info on index.rst or the appropriate first page. This should be placed directly before the table of contents.

Manual Maintainer(s)
------------------------

Who to contact if this manual needs fixing. You can also email
`Tutorials@CyVerse.org <Tutorials@CyVerse.org>`_

.. list-table::
    :header-rows: 1

    * - Maintainer
      - Institution
      - Contact
   * - Your Name
      - CyVerse / UA
      - Yourname@email.com

[ ] Documentation contains the fix/improve instructions on all .rst pages

**Fix or improve this documentation**

- Search for an answer:
   |CyVerse Learning Center|
- Ask us for help:
  click |Intercom| on the lower right-hand side of the page
- Report an issue or submit a change:
  |Github Repo Link|
- Send feedback: `Tutorials@CyVerse.org <Tutorials@CyVerse.org>`_

[ ] All hyperlinks in documentation are on the repo's custom_urls.txt or cyverse_rst_defined_substitutions.txt Note: We want to avoid:
- Best practice is to AVOID inline hyperlinks
- Where possible links should NOT be on the .rst page but on a single document that is included. (e.g. custom_urls.txt or cyverse_rst_defined_substitutions.txt)
- Links should have the form below and open in a new tab:
```
    .. |Link Title| raw:: html

   <a href="https://LINK.URL" target="blank">Link Title</a>
```

3. Overall quality

[ ] Maintainer is assigned and has approved the content
[ ] Editor has checked for quality (spelling, formatting, etc.)
[ ] Sample/test data is available with anonymous/public read access in the appropriate directory at /iplant/home/shared/cyverse_training

CyVerse-learning-materials / tuxedo_w_hisat_stringtie_ballgown_tutorial

Triage for [Project Title] Release [X.X.X] #1

1. Check on file versions (all files below should have a version comment in the first line of the file)

2. Check on the following required formatting for all pages

3. Overall quality