Cytomine-ULiege / S_Segment-CV-AdaptThres-Sample

Cytomine software. Segmentation by computer vision using an adaptive threshold on a sample
Apache License 2.0
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Clever sample area thresholding #5

Open urubens opened 3 years ago

urubens commented 3 years ago

To avoid detecting artifacts as samples, detections with an area lower than image_area_perc_threshold are discarded. By default, it is set to 5%, but this value seems to be too high. As shown in #3, valid samples are discarded.

It could be interesting to test against multiple slides to identify a better threshold.