problem : infer spatial transcriptome

Czh3 / iSpatial

infer whole genome spatial transcriptome by integrating single cell RNAseq and spatial transcriptome

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problem : infer spatial transcriptome #1

Closed jinyuanchun closed 2 years ago

jinyuanchun commented 2 years ago

i installed iSpatial to learn. when running to this step "infer spatial transcriptome"—NA_merFISH_iSpatial = iSpatial::infer(NA_merFISH, NA_scRNA) there is an error

Czh3 commented 2 years ago

It seems mulit-core defect. You may re-run, or use a low number of core by setting "n.core = 1".

jinyuanchun commented 2 years ago

3q, it is ok, when n.core = 1