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Czh3 / iSpatial

infer whole genome spatial transcriptome by integrating single cell RNAseq and spatial transcriptome
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compatibility between different sp platform #5

Open Byronxy opened 1 year ago

Byronxy commented 1 year ago

Hi Chao, Thanks a lot for developing this great tool. It really helps my project. I recently got some data from the Vizgen merFish platform. When I run the pipeline, there are some bugs and I modify the original function and it's solved. This is because Seurat store information from the different platform in different way. I think you can slightly modify the function to increase the compatibility between different platforms.

Czh3 commented 1 year ago

Hi Byronxy, Thank you for your feedback and reporting the bugs. It will be fixed in the next version.