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DARPA-ASKEM / terarium

https://app.terarium.ai
Apache License 2.0
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[BUG]: Failed model variable extraction #3938

Open kbirk opened 3 weeks ago

kbirk commented 3 weeks ago

Error message states the model was not aligned:

2024-06-21 17:50:34 [ERROR] SKEMA link_amr request from document: 8b94bf33-6afe-4878-8f7a-4f41888e9ce2 failed. [software.uncharted.terarium.hmiserver.service.ExtractionService:575]
java.lang.RuntimeException: No attributes found in document
    at software.uncharted.terarium.hmiserver.service.ExtractionService.lambda$alignAMR$2(ExtractionService.java:518)
    at java.base/java.util.concurrent.FutureTask.run(Unknown Source)
    at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
    at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
    at java.base/java.lang.Thread.run(Unknown Source)
2024-06-21 17:50:34 [ERROR] Error aligning model with document [software.uncharted.terarium.hmiserver.controller.knowledge.KnowledgeController:747]
java.util.concurrent.ExecutionException: org.springframework.web.server.ResponseStatusException: 500 INTERNAL_SERVER_ERROR "SKEMA link_amr request from document: 8b94bf33-6afe-4878-8f7a-4f41888e9ce2 failed."
    at java.base/java.util.concurrent.FutureTask.report(Unknown Source)
    at java.base/java.util.concurrent.FutureTask.get(Unknown Source)
    at software.uncharted.terarium.hmiserver.controller.knowledge.KnowledgeController.alignModel(KnowledgeController.java:745)
    at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
    at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
    at java.base/java.lang.reflect.Method.invoke(Unknown Source)
    at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:343)
    at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:196)
    at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:163)
    at org.springframework.aop.framework.CglibAopProxy$CglibMethodInvocation.proceed(CglibAopProxy.java:751)
    at org.springframework.security.access.intercept.aopalliance.MethodSecurityInterceptor.invoke(MethodSecurityInterceptor.java:67)
    at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:184)
    at org.springframework.aop.framework.CglibAopProxy$CglibMethodInvocation.proceed(CglibAopProxy.java:751)
    at org.springframework.aop.framework.CglibAopProxy$DynamicAdvisedInterceptor.intercept(CglibAopProxy.java:703)
    at software.uncharted.terarium.hmiserver.controller.knowledge.KnowledgeController$$SpringCGLIB$$0.alignModel(<generated>)
    at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
    at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
    at java.base/java.lang.reflect.Method.invoke(Unknown Source)
    at org.springframework.web.method.support.InvocableHandlerMethod.doInvoke(InvocableHandlerMethod.java:205)
    at org.springframework.web.method.support.InvocableHandlerMethod.invokeForRequest(InvocableHandlerMethod.java:150)
    at org.springframework.web.servlet.mvc.method.annotation.ServletInvocableHandlerMethod.invokeAndHandle(ServletInvocableHandlerMethod.java:118)
    at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.invokeHandlerMethod(RequestMappingHandlerAdapter.java:884)
    at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.handleInternal(RequestMappingHandlerAdapter.java:797)
    at org.springframework.web.servlet.mvc.method.AbstractHandlerMethodAdapter.handle(AbstractHandlerMethodAdapter.java:87)
    at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:1081)
    at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:974)
    at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:1011)
    at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:914)
    at jakarta.servlet.http.HttpServlet.service(HttpServlet.java:590)
    at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:885)
    at jakarta.servlet.http.HttpServlet.service(HttpServlet.java:658)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:205)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:149)
    at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:51)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:174)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:149)
    at org.springframework.security.web.FilterChainProxy.lambda$doFilterInternal$3(FilterChainProxy.java:231)
    at org.springframework.security.web.ObservationFilterChainDecorator$FilterObservation$SimpleFilterObservation.lambda$wrap$1(ObservationFilterChainDecorator.java:479)
    at org.springframework.security.web.ObservationFilterChainDecorator$AroundFilterObservation$SimpleAroundFilterObservation.lambda$wrap$1(ObservationFilterChainDecorator.java:340)
    at org.springframework.security.web.ObservationFilterChainDecorator.lambda$wrapSecured$0(ObservationFilterChainDecorator.java:82)
    at org.springframework.security.web.ObservationFilterChainDecorator$VirtualFilterChain.doFilter(ObservationFilterChainDecorator.java:128)
    at org.springframework.security.web.access.intercept.AuthorizationFilter.doFilter(AuthorizationFilter.java:100)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.wrapFilter(ObservationFilterChainDecorator.java:240)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.doFilter(ObservationFilterChainDecorator.java:227)
    at org.springframework.security.web.ObservationFilterChainDecorator$VirtualFilterChain.doFilter(ObservationFilterChainDecorator.java:137)
    at org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:126)
    at org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:120)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.wrapFilter(ObservationFilterChainDecorator.java:240)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.doFilter(ObservationFilterChainDecorator.java:227)
    at org.springframework.security.web.ObservationFilterChainDecorator$VirtualFilterChain.doFilter(ObservationFilterChainDecorator.java:137)
    at org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:131)
    at org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:85)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.wrapFilter(ObservationFilterChainDecorator.java:240)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.doFilter(ObservationFilterChainDecorator.java:227)
    at org.springframework.security.web.ObservationFilterChainDecorator$VirtualFilterChain.doFilter(ObservationFilterChainDecorator.java:137)
    at org.springframework.security.web.authentication.AnonymousAuthenticationFilter.doFilter(AnonymousAuthenticationFilter.java:100)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.wrapFilter(ObservationFilterChainDecorator.java:240)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.doFilter(ObservationFilterChainDecorator.java:227)
    at org.springframework.security.web.ObservationFilterChainDecorator$VirtualFilterChain.doFilter(ObservationFilterChainDecorator.java:137)
    at org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:179)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.wrapFilter(ObservationFilterChainDecorator.java:240)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.doFilter(ObservationFilterChainDecorator.java:227)
    at org.springframework.security.web.ObservationFilterChainDecorator$VirtualFilterChain.doFilter(ObservationFilterChainDecorator.java:137)
    at org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:63)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.wrapFilter(ObservationFilterChainDecorator.java:240)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.doFilter(ObservationFilterChainDecorator.java:227)
    at org.springframework.security.web.ObservationFilterChainDecorator$VirtualFilterChain.doFilter(ObservationFilterChainDecorator.java:137)
    at org.springframework.security.oauth2.server.resource.web.authentication.BearerTokenAuthenticationFilter.doFilterInternal(BearerTokenAuthenticationFilter.java:145)
    at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:116)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.wrapFilter(ObservationFilterChainDecorator.java:240)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.doFilter(ObservationFilterChainDecorator.java:227)
    at org.springframework.security.web.ObservationFilterChainDecorator$VirtualFilterChain.doFilter(ObservationFilterChainDecorator.java:137)
    at software.uncharted.terarium.hmiserver.filters.ServiceRequestFilter.doFilter(ServiceRequestFilter.java:73)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.wrapFilter(ObservationFilterChainDecorator.java:240)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.doFilter(ObservationFilterChainDecorator.java:227)
    at org.springframework.security.web.ObservationFilterChainDecorator$VirtualFilterChain.doFilter(ObservationFilterChainDecorator.java:137)
    at org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:107)
    at org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:93)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.wrapFilter(ObservationFilterChainDecorator.java:240)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.doFilter(ObservationFilterChainDecorator.java:227)
    at org.springframework.security.web.ObservationFilterChainDecorator$VirtualFilterChain.doFilter(ObservationFilterChainDecorator.java:137)
    at org.springframework.security.web.header.HeaderWriterFilter.doHeadersAfter(HeaderWriterFilter.java:90)
    at org.springframework.security.web.header.HeaderWriterFilter.doFilterInternal(HeaderWriterFilter.java:75)
    at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:116)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.wrapFilter(ObservationFilterChainDecorator.java:240)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.doFilter(ObservationFilterChainDecorator.java:227)
    at org.springframework.security.web.ObservationFilterChainDecorator$VirtualFilterChain.doFilter(ObservationFilterChainDecorator.java:137)
    at org.springframework.security.web.context.SecurityContextHolderFilter.doFilter(SecurityContextHolderFilter.java:82)
    at org.springframework.security.web.context.SecurityContextHolderFilter.doFilter(SecurityContextHolderFilter.java:69)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.wrapFilter(ObservationFilterChainDecorator.java:240)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.doFilter(ObservationFilterChainDecorator.java:227)
    at org.springframework.security.web.ObservationFilterChainDecorator$VirtualFilterChain.doFilter(ObservationFilterChainDecorator.java:137)
    at org.springframework.security.web.context.request.async.WebAsyncManagerIntegrationFilter.doFilterInternal(WebAsyncManagerIntegrationFilter.java:62)
    at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:116)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.wrapFilter(ObservationFilterChainDecorator.java:240)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.doFilter(ObservationFilterChainDecorator.java:227)
    at org.springframework.security.web.ObservationFilterChainDecorator$VirtualFilterChain.doFilter(ObservationFilterChainDecorator.java:137)
    at org.springframework.security.web.session.DisableEncodeUrlFilter.doFilterInternal(DisableEncodeUrlFilter.java:42)
    at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:116)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.wrapFilter(ObservationFilterChainDecorator.java:240)
    at org.springframework.security.web.ObservationFilterChainDecorator$AroundFilterObservation$SimpleAroundFilterObservation.lambda$wrap$0(ObservationFilterChainDecorator.java:323)
    at org.springframework.security.web.ObservationFilterChainDecorator$ObservationFilter.doFilter(ObservationFilterChainDecorator.java:224)
    at org.springframework.security.web.ObservationFilterChainDecorator$VirtualFilterChain.doFilter(ObservationFilterChainDecorator.java:137)
    at org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:233)
    at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:191)
    at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:352)
    at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:268)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:174)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:149)
    at org.springframework.web.filter.RequestContextFilter.doFilterInternal(RequestContextFilter.java:100)
    at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:116)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:174)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:149)
    at org.springframework.web.filter.FormContentFilter.doFilterInternal(FormContentFilter.java:93)
    at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:116)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:174)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:149)
    at org.springframework.web.filter.ServerHttpObservationFilter.doFilterInternal(ServerHttpObservationFilter.java:109)
    at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:116)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:174)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:149)
    at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:201)
    at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:116)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:174)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:149)
    at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:167)
    at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:90)
    at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:482)
    at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:115)
    at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:93)
    at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:74)
    at org.apache.catalina.valves.RemoteIpValve.invoke(RemoteIpValve.java:735)
    at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:340)
    at org.apache.coyote.http11.Http11Processor.service(Http11Processor.java:391)
    at org.apache.coyote.AbstractProcessorLight.process(AbstractProcessorLight.java:63)
    at org.apache.coyote.AbstractProtocol$ConnectionHandler.process(AbstractProtocol.java:896)
    at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1744)
    at org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:52)
    at org.apache.tomcat.util.threads.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1191)
    at org.apache.tomcat.util.threads.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:659)
    at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
    at java.base/java.lang.Thread.run(Unknown Source)
Caused by: org.springframework.web.server.ResponseStatusException: 500 INTERNAL_SERVER_ERROR "SKEMA link_amr request from document: 8b94bf33-6afe-4878-8f7a-4f41888e9ce2 failed."
    at software.uncharted.terarium.hmiserver.service.ExtractionService.lambda$alignAMR$2(ExtractionService.java:577)
    at java.base/java.util.concurrent.FutureTask.run(Unknown Source)
    at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
    at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
    ... 1 common frames omitted
YohannParis commented 3 weeks ago

This need to be changed to remove the alignement.