DASL-Lab / provoc

PROportions of Variants of Concern using counts, coverage, and a variant matrix.
https://dasl-lab.github.io/provoc/
MIT License
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`predict.provoc` to work with new data #34

Open danerkestey opened 6 months ago

danerkestey commented 6 months ago

Take one sra as one sample and another sra as another sample, fitting the model to b1 and make predictions on b2

b1 <- Baaijens[Baaijens$sra == unique(Baaijens$sra)[1], ] b2 <- Baaijens[Baaijens$sra == unique(Baaijens$sra)[2], ]