Added support for all variant in mutation def selection for formula

DASL-Lab / provoc

PROportions of Variants of Concern using counts, coverage, and a variant matrix.

https://dasl-lab.github.io/provoc/

MIT License

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Closed danerkestey closed 3 months ago

danerkestey commented 4 months ago

User can now define both filtered variants and all variants: Filtered: formula = cbind(count, coverage) ~ B.1.1.7 + B.1.617.2

All variants: formula = cbind(count, coverage) ~ .

Just be careful running ".", takes a while to run through them all :P