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DCAN-Labs / abcd-dicom2bids

For selectively downloading ABCD data QC'ed as good by the DAIC, converting it to BIDS standard input data, selecting the best pair of spin echo field maps, and correcting the sidecar JSON files to meet BIDS Validator spec.
BSD 3-Clause "New" or "Revised" License
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Removing RawStorage #42

Closed mriedel56 closed 2 months ago

mriedel56 commented 2 years ago

Just a couple small notes: 1) this seems hard coded for a specific task (i.e., isn't 383 the number of TRs for one of the tasks) 2) Sometimes we found that one of those DICOMs did not exist, so we were left with a number of DICOMs not divisible by 60, which would cause dcm2niix to fail.

arueter1 commented 2 years ago

Hi @mriedel56 - apologies for the extraordinarily long delay - we have been working on HBCD coding development this since you posted this. I am taking a few folks who may be able to help out in the next month or so. Feel free to close this issue if it's no longer relevant!