When processing anat-only with the --ignore func flag, the pipeline fails to create executive summary outputs. When executive summary is called, it points to the func dir for bids-input and as a result does not make the summary_DCANBOLDProc_v4.0.0 folder:
What happened?
When processing anat-only with the
--ignore func
flag, the pipeline fails to create executive summary outputs. When executive summary is called, it points to the func dir for bids-input and as a result does not make thesummary_DCANBOLDProc_v4.0.0
folder:This can be resolved by setting
--dcan-summary
in this call toNone
if running anat-only (similar to the infant pipeline)@tpandhi has made these updates in PR 121 that includes other changes that we'll want to review separately
What command did you use?
What version of the abcd-hcp pipeline are you using?
v0.1.4
Directory Structure
No response
Relevant log output
Add any additional information or context about the problem here.
No response