brain_radius hardcoded to 50

DCAN-Labs / dcan_bold_processing

functional connectivity preprocessing for resting state fMRI outputs of the dcan-fmri-pipelines

BSD 3-Clause "New" or "Revised" License

7 stars 6 forks source link

brain_radius hardcoded to 50 #17

Closed arueter1 closed 7 months ago

arueter1 commented 3 years ago

Luci noticed that brain_radius appears to be hardcoded as 50 in a few places in DCANBOLDProc. For infant processing, we set brain_radius to 45 and it appears as though DBP overrides this because the FD values output by the pipeline match the values calculated using 50 mm. It would be nice if we could change the code to not override the input brain_radius so we could use this piece of code on infants.

LuciMoore commented 7 months ago

I took a closer look and it appears as though this is no longer an issue if it ever was, I may have been mistaken in my observation