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DCAN-Labs / infant-abcd-bids-pipeline

Human infant pipeline, based on abcd-hcp-pipeline, to process fMRI data.
https://hub.docker.com/r/dcanumn/infant-abcd-bids-pipeline
BSD 3-Clause "New" or "Revised" License
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description bandstop filter flag usage #33

Closed moser297 closed 1 year ago

moser297 commented 1 year ago

The description of this flag does not clearly indicate that the input should be in bpm and not in Hz (as Hz would be the usual choice for a band-stop filter, this should be clarified) --bandstop LOWER UPPER parameters for motion regressor band-stop filter. It is recommended for the boundaries to match the inter- quartile range for participant group respiratory rate (bpm), or to match bids physio data directly [3]. These parameters are highly recommended for data acquired with a frequency of approx. 1 Hz or more (TR<=1.0). Default: no filter

LuciMoore commented 1 year ago

Thank you, @moser297! We have modified the README for clarity