libraries for slicer automated dental tools

[Adriangazelle]

Hello,

I have installed Window 11, 3D Slicer 5.6.1 and the most recent version of the slicer automated dental tools extension. I tried to use AMASSS. After Run prediction I get the following message.

After clicking on the yes button, the python console shows:

ERROR: Could not find a version that satisfies the requirement torch==cu118 (from versions: 1.7.1, 1.8.0, 1.8.1, 1.9.0, 1.9.1, 1.10.0, 1.10.1, 1.10.2, 1.11.0, 1.12.0, 1.12.1, 1.13.0, 1.13.1, 2.0.0, 2.0.1, 2.1.0, 2.1.1, 2.1.2, 2.2.0) ERROR: No matching distribution found for torch==cu118 Traceback (most recent call last): File "C:/Users/Gebruiker/AppData/Local/slicer.org/Slicer 5.6.1/slicer.org/Extensions-32438/SlicerAutomatedDentalTools/lib/Slicer-5.6/qt-scripted-modules/AMASSS.py", line 684, in onPredictButton libs_installation = install_function(list_libs) File "C:/Users/Gebruiker/AppData/Local/slicer.org/Slicer 5.6.1/slicer.org/Extensions-32438/SlicerAutomatedDentalTools/lib/Slicer-5.6/qt-scripted-modules/AMASSS.py", line 81, in install_function pip_install(lib_version) File "C:\Users\Gebruiker\AppData\Local\slicer.org\Slicer 5.6.1\bin\Python\slicer\util.py", line 3887, in pip_install _executePythonModule("pip", args) File "C:\Users\Gebruiker\AppData\Local\slicer.org\Slicer 5.6.1\bin\Python\slicer\util.py", line 3848, in _executePythonModule logProcessOutput(proc) File "C:\Users\Gebruiker\AppData\Local\slicer.org\Slicer 5.6.1\bin\Python\slicer\util.py", line 3814, in logProcessOutput raise CalledProcessError(retcode, proc.args, output=proc.stdout, stderr=proc.stderr) subprocess.CalledProcessError: Command '['C:/Users/Gebruiker/AppData/Local/slicer.org/Slicer 5.6.1/bin/../bin\PythonSlicer.EXE', '-m', 'pip', 'install', 'torch==cu118']' returned non-zero exit status 1.

How can I make changes to the libraries?

Adrian

[Jeanneclre]

Hello @Adriangazelle Thank you for your input. Indeed, something wasn't done properly for the installation of torch. It should be fixed after the pull request is merged. Please tell us if you have any other issue :)

Jeanne

[Adriangazelle]

Today I reïnstalled slicer 5.6.1 and Slicer automated dental tools. In AMASSS, after run prediction:

Traceback (most recent call last): File "C:\Users\Gebruiker\AppData\Local\slicer.org\Slicer 5.6.1\lib\Python\Lib\site-packages\pkg_resources_vendor\packaging\requirements.py", line 35, in init parsed = _parse_requirement(requirement_string) File "C:\Users\Gebruiker\AppData\Local\slicer.org\Slicer 5.6.1\lib\Python\Lib\site-packages\pkg_resources_vendor\packaging_parser.py", line 64, in parse_requirement return _parse_requirement(Tokenizer(source, rules=DEFAULT_RULES)) File "C:\Users\Gebruiker\AppData\Local\slicer.org\Slicer 5.6.1\lib\Python\Lib\site-packages\pkg_resources_vendor\packaging_parser.py", line 82, in _parse_requirement url, specifier, marker = _parse_requirement_details(tokenizer) File "C:\Users\Gebruiker\AppData\Local\slicer.org\Slicer 5.6.1\lib\Python\Lib\site-packages\pkg_resources_vendor\packaging_parser.py", line 126, in _parse_requirement_details marker = _parse_requirement_marker( File "C:\Users\Gebruiker\AppData\Local\slicer.org\Slicer 5.6.1\lib\Python\Lib\site-packages\pkg_resources_vendor\packaging_parser.py", line 147, in _parse_requirement_marker tokenizer.raise_syntax_error( File "C:\Users\Gebruiker\AppData\Local\slicer.org\Slicer 5.6.1\lib\Python\Lib\site-packages\pkg_resources_vendor\packaging_tokenizer.py", line 165, in raise_syntax_error raise ParserSyntaxError( pkg_resources.extern.packaging._tokenizer.ParserSyntaxError: Expected end or semicolon (after name and no valid version specifier) torch, torchvision, torchaudio ^

The above exception was the direct cause of the following exception:

Traceback (most recent call last): File "C:/Users/Gebruiker/AppData/Local/slicer.org/Slicer 5.6.1/slicer.org/Extensions-32438/SlicerAutomatedDentalTools/lib/Slicer-5.6/qt-scripted-modules/AMASSS.py", line 704, in onPredictButton libs_installation = install_function(list_libs,platform.system()) File "C:/Users/Gebruiker/AppData/Local/slicer.org/Slicer 5.6.1/slicer.org/Extensions-32438/SlicerAutomatedDentalTools/lib/Slicer-5.6/qt-scripted-modules/AMASSS.py", line 51, in install_function if not check_lib_installed(lib, version): File "C:/Users/Gebruiker/AppData/Local/slicer.org/Slicer 5.6.1/slicer.org/Extensions-32438/SlicerAutomatedDentalTools/lib/Slicer-5.6/qt-scripted-modules/AMASSS.py", line 31, in check_lib_installed installed_version = pkg_resources.get_distribution(lib_name).version File "C:\Users\Gebruiker\AppData\Local\slicer.org\Slicer 5.6.1\lib\Python\Lib\site-packages\pkg_resources__init.py", line 526, in get_distribution dist = Requirement.parse(dist) File "C:\Users\Gebruiker\AppData\Local\slicer.org\Slicer 5.6.1\lib\Python\Lib\site-packages\pkg_resources__init.py", line 3215, in parse (req,) = parse_requirements(s) File "C:\Users\Gebruiker\AppData\Local\slicer.org\Slicer 5.6.1\lib\Python\Lib\site-packages\pkg_resources\init.py", line 3174, in init super(Requirement, self).init__(requirement_string) File "C:\Users\Gebruiker\AppData\Local\slicer.org\Slicer 5.6.1\lib\Python\Lib\site-packages\pkg_resources_vendor\packaging\requirements.py", line 37, in init__ raise InvalidRequirement(str(e)) from e pkg_resources.extern.packaging.requirements.InvalidRequirement: Expected end or semicolon (after name and no valid version specifier) torch, torchvision, torchaudio ^

I am sorry, it doesn't work on my pc.

Adrian