fix: create demand reaction, not exchange reaction

DD-DeCaF / simulations

Model service which takes care of adjusting model according to incoming messages and returns information such as fluxes, theoretical maximum yields, etc

Apache License 2.0

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fix: create demand reaction, not exchange reaction #144

Closed kvikshaug closed 5 years ago

kvikshaug commented 5 years ago

The metabolite should be able to leave the system and a demand reaction is the correct type for that.

See: https://cobrapy.readthedocs.io/en/latest/autoapi/cobra/core/model/index.html?highlight=add_boundary#cobra.core.model.Model.add_boundary

squash-labs[bot] commented 5 years ago

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Test this branch here: https://demand-for-added-metabolites-v1zf0.squash.io