Make the Lotka-Volterra example practical - Githubissues

DEEPDIP-project / MUSCLE3playground

Test playground for MUSCLE3

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Make the Lotka-Volterra example practical #2

Closed PabRod closed 9 months ago

PabRod commented 10 months ago

Problem

The Lotka-Volterra simulation we programmed is not very elegant nor practical.

Solution

[x] Simulate a real-world problem by refactoring the predator and prey dynamics as totally independent (i.e.: for the prey dynamics the predator is a constant, and viceversa).
[x] Write the MUSCLE3 structure as a wrapper around the dynamics.
[ ] Make sure that the output is useful, i.e.:, that the whole time series is exported, and not just the final state.

Misc

Related to #1.

PabRod commented 9 months ago

Abandoned due to the decision of sticking to Julia, at least temporarily.