DEIB-GECO / GMQL-WEB

GMQL WEB Interface
http://www.bioinformatics.deib.polimi.it/geco/?home
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Schema attribute names and order of standard formats #52

Closed marcomass closed 6 years ago

marcomass commented 7 years ago

Correct the name and order of the region attributes in schemas of standard formats, both in the current repository and, mostly, in the GMQL-importer software.

For narrowpeak format , they should be (in this order): chrom, start, end, name, score, strand, signal, pValue, qValue, peak For broadpeak format , they should be (in this order): chrom, start, end, name, score, strand, signal, pValue, qValue For GTF format , they should be (in this order): chrom, source, feature, start, end, score, strand, frame, + other specific attributes

marcomass commented 6 years ago

In narrowpeak format: