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DEIB-GECO / GMQL

GMQL - GenoMetric Query Language
http://www.bioinformatics.deib.polimi.it/geco/
Apache License 2.0
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PROJECT metadata_update compiler bug #59

Closed marcomass closed 7 years ago

marcomass commented 7 years ago

In PROJECT metadata_update, multiple operations specified are not recognized (only single one). Please fix, making it possible to specify multiple operations with the same logic as for region_update. Test example: DATA = SELECT(cell == "Urothelia" AND ID == "40") HG19_ENCODE_NARROW; RES = PROJECT(metadata_update: _id1 AS ID + 3, _id2 AS ID - 3 ) DATA; MATERIALIZE RES into res;

pp86 commented 7 years ago

@OlgaGorlova this functionality is not enabled at engine level for the time being (most probably is a very easy one, just needed to iterate over all the received modifiers).

I committed the related compiler changes in the following branch: https://github.com/DEIB-GECO/GMQL/compare/multiple_metadata_update_issue59

I am removing my assignment, please add me back if my help is needed.