Reorganise test data set

DEploid-dev / DEploid

dEploid is designed for deconvoluting mixed genomes with unknown proportions. Traditional ‘phasing’ programs are limited to diploid organisms. Our method modifies Li and Stephen’s algorithm with Markov chain Monte Carlo (MCMC) approaches, and builds a generic framework that allows haloptype searches in a multiple infection setting.

http://deploid.readthedocs.io/en/latest/index.html

GNU General Public License v3.0

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Reorganise test data set #125

Closed shajoezhu closed 8 years ago

shajoezhu commented 8 years ago

Dataset includes

[x] testData
[x] exampleData

shajoezhu commented 8 years ago

checking changes in unittest files

[x] tests/unittest/test_dEploidIO.cpp
[x] tests/unittest/test_mcmc.cpp
[x] tests/unittest/test_panel.cpp
[x] tests/unittest/test_runner.cpp
[x] tests/unittest/test_txtReader.cpp
[x] tests/unittest/test_updatePairHap.cpp
[x] tests/unittest/test_updateSingleHap.cpp
[x] tests/unittest/test_utilities.cpp
[x] tests/unittest/test_vcfReader.cpp

shajoezhu commented 8 years ago

closed by #128