DEploid-dev / DEploid

dEploid is designed for deconvoluting mixed genomes with unknown proportions. Traditional ‘phasing’ programs are limited to diploid organisms. Our method modifies Li and Stephen’s algorithm with Markov chain Monte Carlo (MCMC) approaches, and builds a generic framework that allows haloptype searches in a multiple infection setting.
http://deploid.readthedocs.io/en/latest/index.html
GNU General Public License v3.0
20 stars 10 forks source link

mark ibd segment locations #187

Closed shajoezhu closed 7 years ago

coveralls commented 7 years ago

Coverage Status

Coverage increased (+0.8%) to 93.345% when pulling 6b68df3ad44ecdfc40202568566dbdc37e220479 on ibdRecomb into 7b86164c83470adb9e567a7ea25ed8f503f67822 on master.

coveralls commented 7 years ago

Coverage Status

Coverage increased (+0.8%) to 93.345% when pulling 6b68df3ad44ecdfc40202568566dbdc37e220479 on ibdRecomb into 7b86164c83470adb9e567a7ea25ed8f503f67822 on master.

coveralls commented 7 years ago

Coverage Status

Coverage increased (+0.8%) to 93.354% when pulling c63da0d0ba469052fcc1166c59be92226a1dc46e on ibdRecomb into 7b86164c83470adb9e567a7ea25ed8f503f67822 on master.

coveralls commented 7 years ago

Coverage Status

Coverage increased (+0.8%) to 93.354% when pulling c63da0d0ba469052fcc1166c59be92226a1dc46e on ibdRecomb into 7b86164c83470adb9e567a7ea25ed8f503f67822 on master.

coveralls commented 7 years ago

Coverage Status

Coverage increased (+0.8%) to 93.354% when pulling c63da0d0ba469052fcc1166c59be92226a1dc46e on ibdRecomb into 7b86164c83470adb9e567a7ea25ed8f503f67822 on master.