DEploid-dev / DEploid

dEploid is designed for deconvoluting mixed genomes with unknown proportions. Traditional ‘phasing’ programs are limited to diploid organisms. Our method modifies Li and Stephen’s algorithm with Markov chain Monte Carlo (MCMC) approaches, and builds a generic framework that allows haloptype searches in a multiple infection setting.
http://deploid.readthedocs.io/en/latest/index.html
GNU General Public License v3.0
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close #193 #195

Closed shajoezhu closed 7 years ago

coveralls commented 7 years ago

Coverage Status

Coverage decreased (-1.6%) to 91.418% when pulling 4837275fc8ecba92838219bc1a070e792dedb91f on issue193 into 484696008cd57576062e923241ab814bf8b67d4f on master.

coveralls commented 7 years ago

Coverage Status

Coverage decreased (-1.6%) to 91.418% when pulling 4837275fc8ecba92838219bc1a070e792dedb91f on issue193 into 484696008cd57576062e923241ab814bf8b67d4f on master.