dEploid is designed for deconvoluting mixed genomes with unknown proportions. Traditional ‘phasing’ programs are limited to diploid organisms. Our method modifies Li and Stephen’s algorithm with Markov chain Monte Carlo (MCMC) approaches, and builds a generic framework that allows haloptype searches in a multiple infection setting.
Coverage remained the same at 93.059% when pulling 1933ea166accceffd7755a58795f364b4d957e85 on issue208 into b39ea27f49c8ff2df9155e8857d426e5355b9296 on master.