dEploid is designed for deconvoluting mixed genomes with unknown proportions. Traditional ‘phasing’ programs are limited to diploid organisms. Our method modifies Li and Stephen’s algorithm with Markov chain Monte Carlo (MCMC) approaches, and builds a generic framework that allows haloptype searches in a multiple infection setting.
Coverage increased (+0.006%) to 93.12% when pulling 4add323c9fb4de9a738163ff63c4e657dc33582d on circular into 849b485c1e98bfb2efc1ee318f4adece543dcd2f on master.