paint the ibd probs with fwd-bwd alg

DEploid-dev / DEploid

dEploid is designed for deconvoluting mixed genomes with unknown proportions. Traditional ‘phasing’ programs are limited to diploid organisms. Our method modifies Li and Stephen’s algorithm with Markov chain Monte Carlo (MCMC) approaches, and builds a generic framework that allows haloptype searches in a multiple infection setting.

http://deploid.readthedocs.io/en/latest/index.html

GNU General Public License v3.0

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paint the ibd probs with fwd-bwd alg #237

Closed shajoezhu closed 6 years ago

shajoezhu commented 7 years ago

interface
- flag -ibdPainting, need to check if the proportion is given.
- output prefix

shajoezhu commented 6 years ago

https://github.com/mcveanlab/DEploid/pull/243