DEploid-dev / DEploid

dEploid is designed for deconvoluting mixed genomes with unknown proportions. Traditional ‘phasing’ programs are limited to diploid organisms. Our method modifies Li and Stephen’s algorithm with Markov chain Monte Carlo (MCMC) approaches, and builds a generic framework that allows haloptype searches in a multiple infection setting.
http://deploid.readthedocs.io/en/latest/index.html
GNU General Public License v3.0
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adding ibdonly flag #276

Closed shajoezhu closed 6 years ago

coveralls commented 6 years ago

Coverage Status

Coverage increased (+8.9%) to 90.93% when pulling 9db1cd94ca31bff7f122eb1e6ff074bba15d2169 on wsaf-gt0-IBD into 895e308cb4cf3dfc8dac7e92b7320f4d01812a98 on master.