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DEploid-dev / DEploid

dEploid is designed for deconvoluting mixed genomes with unknown proportions. Traditional ‘phasing’ programs are limited to diploid organisms. Our method modifies Li and Stephen’s algorithm with Markov chain Monte Carlo (MCMC) approaches, and builds a generic framework that allows haloptype searches in a multiple infection setting.
http://deploid.readthedocs.io/en/latest/index.html
GNU General Public License v3.0
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Improve current plotting utilities to support the latest version ... #349

Open shajoezhu opened 3 years ago

shajoezhu commented 3 years ago

Set working examples ....

shajoezhu commented 3 years ago

adding documentation for

  1. plaf
  2. reference strain