Action list - Githubissues

DEploid-dev / mixedIBD

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Action list #23

Closed shajoezhu closed 6 years ago

shajoezhu commented 6 years ago

JAG

[x] Contact Ricard for pf6 meta data
[x] Filter low-quality haplotypes

JZ

[x] filterout mixed species samples
[x] check pf crosses envolope
[x] Repeat mixed of 2 validation using Africa samples, use 44/55, 25/75, 10/90 mixings with 3 levels of relatedness
[x] Figure 1
[x] Figure 2
[x] Figure 3
[x] Figure 5

JH

[ ] IBD vs. MI IBD violin plot
[x] Classify all mixed samples from bg IBD

JZ + JH

[x] Figure 4